Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.23□□□□□ -0.13
ClgnP52194 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClgnP52194 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ClgnP52194 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ClgnP52194 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ClgnP52194 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ClgnP52194 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.22□□□□□ -0.13
ClgnP52194 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClgnP52194 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
ClgnP52194 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.22□□□□□ -0.13
ClgnP52194 Gm43061-201ENSMUST00000198850 2241 ntBASIC14.22□□□□□ -0.13
ClgnP52194 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.22□□□□□ -0.13
ClgnP52194 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
ClgnP52194 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
ClgnP52194 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.22□□□□□ -0.13
ClgnP52194 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClgnP52194 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.22□□□□□ -0.13
ClgnP52194 Gm26308-201ENSMUST00000157768 69 ntBASIC14.22□□□□□ -0.13
ClgnP52194 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClgnP52194 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClgnP52194 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ClgnP52194 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClgnP52194 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ClgnP52194 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
ClgnP52194 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClgnP52194 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.22□□□□□ -0.13
ClgnP52194 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClgnP52194 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClgnP52194 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ClgnP52194 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
ClgnP52194 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClgnP52194 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClgnP52194 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClgnP52194 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClgnP52194 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.21□□□□□ -0.13
ClgnP52194 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClgnP52194 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClgnP52194 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClgnP52194 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ClgnP52194 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.21□□□□□ -0.13
ClgnP52194 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClgnP52194 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
ClgnP52194 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClgnP52194 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClgnP52194 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
ClgnP52194 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
ClgnP52194 Gm6222-201ENSMUST00000120787 396 ntBASIC14.21□□□□□ -0.13
ClgnP52194 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ClgnP52194 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
ClgnP52194 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ClgnP52194 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ClgnP52194 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
ClgnP52194 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
ClgnP52194 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClgnP52194 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClgnP52194 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClgnP52194 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClgnP52194 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClgnP52194 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
ClgnP52194 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ClgnP52194 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClgnP52194 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
ClgnP52194 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClgnP52194 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClgnP52194 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
ClgnP52194 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ClgnP52194 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ClgnP52194 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
ClgnP52194 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.14
ClgnP52194 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
ClgnP52194 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ClgnP52194 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClgnP52194 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClgnP52194 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ClgnP52194 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ClgnP52194 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClgnP52194 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ClgnP52194 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.2□□□□□ -0.14
ClgnP52194 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ClgnP52194 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ClgnP52194 Gm15693-201ENSMUST00000120470 637 ntBASIC14.2□□□□□ -0.14
ClgnP52194 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ClgnP52194 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ClgnP52194 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ClgnP52194 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
ClgnP52194 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClgnP52194 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
ClgnP52194 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClgnP52194 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClgnP52194 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClgnP52194 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClgnP52194 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ClgnP52194 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
ClgnP52194 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
ClgnP52194 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClgnP52194 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
ClgnP52194 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ClgnP52194 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClgnP52194 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ClgnP52194 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms