Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.17□□□□□ -0.3
RoraP51448 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
RoraP51448 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
RoraP51448 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RoraP51448 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.17□□□□□ -0.3
RoraP51448 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.17□□□□□ -0.3
RoraP51448 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.17□□□□□ -0.3
RoraP51448 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
RoraP51448 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.17□□□□□ -0.3
RoraP51448 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RoraP51448 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Gm12138-201ENSMUST00000122180 951 ntBASIC13.17□□□□□ -0.3
RoraP51448 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.17□□□□□ -0.3
RoraP51448 Gm5354-201ENSMUST00000182417 973 ntBASIC13.17□□□□□ -0.3
RoraP51448 Gm37714-201ENSMUST00000194742 342 ntBASIC13.17□□□□□ -0.3
RoraP51448 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RoraP51448 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.17□□□□□ -0.3
RoraP51448 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.17□□□□□ -0.3
RoraP51448 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.17□□□□□ -0.3
RoraP51448 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
RoraP51448 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
RoraP51448 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RoraP51448 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RoraP51448 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RoraP51448 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.16□□□□□ -0.3
RoraP51448 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
RoraP51448 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RoraP51448 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
RoraP51448 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RoraP51448 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RoraP51448 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RoraP51448 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RoraP51448 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
RoraP51448 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RoraP51448 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RoraP51448 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.16□□□□□ -0.3
RoraP51448 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RoraP51448 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RoraP51448 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RoraP51448 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.16□□□□□ -0.3
RoraP51448 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RoraP51448 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RoraP51448 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RoraP51448 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RoraP51448 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RoraP51448 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RoraP51448 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RoraP51448 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RoraP51448 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RoraP51448 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RoraP51448 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RoraP51448 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RoraP51448 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RoraP51448 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RoraP51448 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RoraP51448 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RoraP51448 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RoraP51448 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.15□□□□□ -0.3
RoraP51448 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RoraP51448 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RoraP51448 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
RoraP51448 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.15□□□□□ -0.3
RoraP51448 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.15□□□□□ -0.3
RoraP51448 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RoraP51448 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RoraP51448 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RoraP51448 Mir6392-201ENSMUST00000184924 108 ntBASIC13.15□□□□□ -0.3
RoraP51448 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms