Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prox1P48437 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prox1P48437 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prox1P48437 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Prox1P48437 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.38□□□□□ -0.27
Prox1P48437 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Prox1P48437 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Prox1P48437 Gm2213-201ENSMUST00000197485 688 ntBASIC13.38□□□□□ -0.27
Prox1P48437 Gm45098-201ENSMUST00000207179 657 ntBASIC13.38□□□□□ -0.27
Prox1P48437 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prox1P48437 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prox1P48437 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.38□□□□□ -0.27
Prox1P48437 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Prox1P48437 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prox1P48437 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Prox1P48437 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prox1P48437 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Prox1P48437 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prox1P48437 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prox1P48437 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.38□□□□□ -0.27
Prox1P48437 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prox1P48437 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prox1P48437 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prox1P48437 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.37□□□□□ -0.27
Prox1P48437 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.37□□□□□ -0.27
Prox1P48437 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Prox1P48437 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prox1P48437 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prox1P48437 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prox1P48437 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prox1P48437 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prox1P48437 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prox1P48437 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.37□□□□□ -0.27
Prox1P48437 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prox1P48437 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prox1P48437 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prox1P48437 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Prox1P48437 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prox1P48437 Gm16198-201ENSMUST00000118766 670 ntBASIC13.37□□□□□ -0.27
Prox1P48437 Gm13597-201ENSMUST00000121239 375 ntBASIC13.37□□□□□ -0.27
Prox1P48437 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Prox1P48437 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Prox1P48437 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.37□□□□□ -0.27
Prox1P48437 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.37□□□□□ -0.27
Prox1P48437 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.37□□□□□ -0.27
Prox1P48437 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.37□□□□□ -0.27
Prox1P48437 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.37□□□□□ -0.27
Prox1P48437 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.37□□□□□ -0.27
Prox1P48437 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.37□□□□□ -0.27
Prox1P48437 Thap2-203ENSMUST00000218989 527 ntBASIC13.37□□□□□ -0.27
Prox1P48437 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prox1P48437 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prox1P48437 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.37□□□□□ -0.27
Prox1P48437 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Prox1P48437 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prox1P48437 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Prox1P48437 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Prox1P48437 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Prox1P48437 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prox1P48437 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.37□□□□□ -0.27
Prox1P48437 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prox1P48437 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prox1P48437 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Prox1P48437 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prox1P48437 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prox1P48437 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prox1P48437 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Prox1P48437 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prox1P48437 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prox1P48437 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prox1P48437 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prox1P48437 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Prox1P48437 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Prox1P48437 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prox1P48437 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Prox1P48437 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prox1P48437 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prox1P48437 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Prox1P48437 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Prox1P48437 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prox1P48437 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Prox1P48437 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Prox1P48437 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.36□□□□□ -0.27
Prox1P48437 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Prox1P48437 Gm5364-201ENSMUST00000216789 889 ntBASIC13.36□□□□□ -0.27
Prox1P48437 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prox1P48437 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prox1P48437 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Prox1P48437 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prox1P48437 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prox1P48437 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prox1P48437 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.36□□□□□ -0.27
Prox1P48437 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Prox1P48437 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prox1P48437 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prox1P48437 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prox1P48437 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prox1P48437 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prox1P48437 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Prox1P48437 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms