Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx3P48381 Acot6-202ENSMUST00000222921 3622 ntBASIC12.58□□□□□ -0.4
Rfx3P48381 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx3P48381 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx3P48381 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Rfx3P48381 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Rfx3P48381 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx3P48381 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.58□□□□□ -0.4
Rfx3P48381 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.58□□□□□ -0.4
Rfx3P48381 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx3P48381 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx3P48381 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.58□□□□□ -0.4
Rfx3P48381 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx3P48381 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx3P48381 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.58□□□□□ -0.4
Rfx3P48381 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Rfx3P48381 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.58□□□□□ -0.4
Rfx3P48381 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.58□□□□□ -0.4
Rfx3P48381 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx3P48381 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx3P48381 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx3P48381 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Rfx3P48381 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx3P48381 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx3P48381 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx3P48381 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx3P48381 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx3P48381 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx3P48381 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Rfx3P48381 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx3P48381 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx3P48381 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx3P48381 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx3P48381 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Rfx3P48381 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx3P48381 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx3P48381 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx3P48381 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx3P48381 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx3P48381 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx3P48381 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx3P48381 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Rfx3P48381 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.57□□□□□ -0.4
Rfx3P48381 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx3P48381 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx3P48381 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx3P48381 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx3P48381 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx3P48381 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.57□□□□□ -0.4
Rfx3P48381 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx3P48381 Gm25925-201ENSMUST00000158314 306 ntBASIC12.57□□□□□ -0.4
Rfx3P48381 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.57□□□□□ -0.4
Rfx3P48381 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.57□□□□□ -0.4
Rfx3P48381 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Rfx3P48381 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx3P48381 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx3P48381 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.57□□□□□ -0.4
Rfx3P48381 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Rfx3P48381 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.57□□□□□ -0.4
Rfx3P48381 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.57□□□□□ -0.4
Rfx3P48381 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx3P48381 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx3P48381 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx3P48381 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx3P48381 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx3P48381 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx3P48381 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx3P48381 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.57□□□□□ -0.4
Rfx3P48381 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.57□□□□□ -0.4
Rfx3P48381 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx3P48381 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx3P48381 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx3P48381 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx3P48381 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx3P48381 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx3P48381 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rfx3P48381 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx3P48381 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx3P48381 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx3P48381 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rfx3P48381 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx3P48381 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Rfx3P48381 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.56□□□□□ -0.4
Rfx3P48381 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rfx3P48381 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx3P48381 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx3P48381 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.56□□□□□ -0.4
Rfx3P48381 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rfx3P48381 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.56□□□□□ -0.4
Rfx3P48381 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.56□□□□□ -0.4
Rfx3P48381 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.56□□□□□ -0.4
Rfx3P48381 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.56□□□□□ -0.4
Rfx3P48381 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx3P48381 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx3P48381 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx3P48381 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx3P48381 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rfx3P48381 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.56□□□□□ -0.4
Rfx3P48381 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rfx3P48381 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms