Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
TgfaP48030 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TgfaP48030 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TgfaP48030 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TgfaP48030 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TgfaP48030 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.04□□□□□ -0.48
TgfaP48030 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.04□□□□□ -0.48
TgfaP48030 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TgfaP48030 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TgfaP48030 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
TgfaP48030 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TgfaP48030 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TgfaP48030 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TgfaP48030 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
TgfaP48030 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TgfaP48030 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TgfaP48030 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
TgfaP48030 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.03□□□□□ -0.48
TgfaP48030 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TgfaP48030 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TgfaP48030 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
TgfaP48030 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TgfaP48030 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TgfaP48030 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
TgfaP48030 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
TgfaP48030 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TgfaP48030 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
TgfaP48030 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TgfaP48030 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.03□□□□□ -0.48
TgfaP48030 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
TgfaP48030 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TgfaP48030 Gm8810-201ENSMUST00000172895 754 ntBASIC12.03□□□□□ -0.48
TgfaP48030 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.03□□□□□ -0.48
TgfaP48030 Gm29705-201ENSMUST00000212598 474 ntBASIC12.03□□□□□ -0.48
TgfaP48030 Mir497b-201ENSMUST00000093601 125 ntBASIC12.03□□□□□ -0.48
TgfaP48030 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.03□□□□□ -0.48
TgfaP48030 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TgfaP48030 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TgfaP48030 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TgfaP48030 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
TgfaP48030 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TgfaP48030 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TgfaP48030 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TgfaP48030 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TgfaP48030 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TgfaP48030 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
TgfaP48030 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TgfaP48030 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TgfaP48030 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TgfaP48030 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.03□□□□□ -0.48
TgfaP48030 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TgfaP48030 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TgfaP48030 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TgfaP48030 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
TgfaP48030 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
TgfaP48030 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.02□□□□□ -0.48
TgfaP48030 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TgfaP48030 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.48
TgfaP48030 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
TgfaP48030 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
TgfaP48030 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
TgfaP48030 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.02□□□□□ -0.49
TgfaP48030 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
TgfaP48030 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.02□□□□□ -0.49
TgfaP48030 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.02□□□□□ -0.49
TgfaP48030 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.02□□□□□ -0.49
TgfaP48030 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
TgfaP48030 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
TgfaP48030 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
TgfaP48030 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.02□□□□□ -0.49
TgfaP48030 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
TgfaP48030 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TgfaP48030 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms