Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HttP42859 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
HttP42859 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HttP42859 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HttP42859 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HttP42859 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
HttP42859 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.46□□□□□ -0.1
HttP42859 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.46□□□□□ -0.1
HttP42859 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HttP42859 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HttP42859 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HttP42859 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HttP42859 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HttP42859 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HttP42859 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HttP42859 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.45□□□□□ -0.1
HttP42859 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HttP42859 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HttP42859 Gm19353-201ENSMUST00000184561 445 ntBASIC14.45□□□□□ -0.1
HttP42859 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.45□□□□□ -0.1
HttP42859 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.45□□□□□ -0.1
HttP42859 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.45□□□□□ -0.1
HttP42859 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HttP42859 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.45□□□□□ -0.1
HttP42859 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HttP42859 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HttP42859 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HttP42859 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HttP42859 Gm7666-201ENSMUST00000146631 819 ntBASIC14.45□□□□□ -0.1
HttP42859 Gm25700-201ENSMUST00000177693 110 ntBASIC14.45□□□□□ -0.1
HttP42859 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HttP42859 Gm4768-201ENSMUST00000206199 686 ntBASIC14.45□□□□□ -0.1
HttP42859 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
HttP42859 Gm10179-201ENSMUST00000086233 688 ntBASIC14.45□□□□□ -0.1
HttP42859 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HttP42859 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HttP42859 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.45□□□□□ -0.1
HttP42859 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HttP42859 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.45□□□□□ -0.1
HttP42859 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HttP42859 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
HttP42859 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.44□□□□□ -0.1
HttP42859 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC14.44□□□□□ -0.1
HttP42859 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HttP42859 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.44□□□□□ -0.1
HttP42859 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HttP42859 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.44□□□□□ -0.1
HttP42859 Gm19459-201ENSMUST00000176240 835 ntBASIC14.44□□□□□ -0.1
HttP42859 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.44□□□□□ -0.1
HttP42859 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
HttP42859 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HttP42859 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.44□□□□□ -0.1
HttP42859 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HttP42859 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HttP42859 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HttP42859 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HttP42859 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HttP42859 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HttP42859 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HttP42859 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC14.44□□□□□ -0.1
HttP42859 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.44□□□□□ -0.1
HttP42859 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.44□□□□□ -0.1
HttP42859 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HttP42859 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HttP42859 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HttP42859 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HttP42859 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HttP42859 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HttP42859 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HttP42859 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HttP42859 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HttP42859 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HttP42859 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HttP42859 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC14.44□□□□□ -0.1
HttP42859 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.44□□□□□ -0.1
HttP42859 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HttP42859 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC14.44□□□□□ -0.1
HttP42859 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.44□□□□□ -0.1
HttP42859 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HttP42859 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HttP42859 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HttP42859 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HttP42859 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
HttP42859 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HttP42859 Gm15897-201ENSMUST00000117770 1486 ntBASIC14.43□□□□□ -0.1
HttP42859 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HttP42859 Gm24749-201ENSMUST00000157838 343 ntBASIC14.43□□□□□ -0.1
HttP42859 Gm5778-201ENSMUST00000171003 1072 ntBASIC14.43□□□□□ -0.1
HttP42859 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HttP42859 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
HttP42859 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HttP42859 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.43□□□□□ -0.1
HttP42859 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HttP42859 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HttP42859 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HttP42859 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HttP42859 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HttP42859 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
HttP42859 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HttP42859 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms