Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-2P42580 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-2P42580 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-2P42580 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-2P42580 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Nkx1-2P42580 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Nkx1-2P42580 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-2P42580 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-2P42580 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-2P42580 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-2P42580 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-2P42580 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-2P42580 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Nkx1-2P42580 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-2P42580 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-2P42580 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC17.11■□□□□ 0.33
Nkx1-2P42580 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-2P42580 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx1-2P42580 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Nkx1-2P42580 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx1-2P42580 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx1-2P42580 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Nkx1-2P42580 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx1-2P42580 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Nkx1-2P42580 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx1-2P42580 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx1-2P42580 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx1-2P42580 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx1-2P42580 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx1-2P42580 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx1-2P42580 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Nkx1-2P42580 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Nkx1-2P42580 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC17.1■□□□□ 0.33
Nkx1-2P42580 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx1-2P42580 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx1-2P42580 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Nkx1-2P42580 Gm11594-201ENSMUST00000122313 162 ntBASIC17.1■□□□□ 0.33
Nkx1-2P42580 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.1■□□□□ 0.33
Nkx1-2P42580 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.1■□□□□ 0.33
Nkx1-2P42580 Gm27631-201ENSMUST00000184163 466 ntBASIC17.1■□□□□ 0.33
Nkx1-2P42580 Gm44335-201ENSMUST00000196879 141 ntBASIC17.1■□□□□ 0.33
Nkx1-2P42580 Gm44297-201ENSMUST00000198304 141 ntBASIC17.1■□□□□ 0.33
Nkx1-2P42580 Gm44346-201ENSMUST00000198851 141 ntBASIC17.1■□□□□ 0.33
Nkx1-2P42580 Gm43125-201ENSMUST00000201724 730 ntBASIC17.1■□□□□ 0.33
Nkx1-2P42580 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC17.1■□□□□ 0.33
Nkx1-2P42580 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.1■□□□□ 0.33
Nkx1-2P42580 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx1-2P42580 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx1-2P42580 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx1-2P42580 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx1-2P42580 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx1-2P42580 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx1-2P42580 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx1-2P42580 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx1-2P42580 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx1-2P42580 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Nkx1-2P42580 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx1-2P42580 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx1-2P42580 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx1-2P42580 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Nkx1-2P42580 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx1-2P42580 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx1-2P42580 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx1-2P42580 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx1-2P42580 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Nkx1-2P42580 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx1-2P42580 Gm25287-201ENSMUST00000103846 110 ntBASIC17.09■□□□□ 0.33
Nkx1-2P42580 Gm22918-201ENSMUST00000103855 110 ntBASIC17.09■□□□□ 0.33
Nkx1-2P42580 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Nkx1-2P42580 Gm6222-201ENSMUST00000120787 396 ntBASIC17.09■□□□□ 0.33
Nkx1-2P42580 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.09■□□□□ 0.33
Nkx1-2P42580 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.09■□□□□ 0.33
Nkx1-2P42580 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.09■□□□□ 0.33
Nkx1-2P42580 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.09■□□□□ 0.33
Nkx1-2P42580 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx1-2P42580 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.09■□□□□ 0.33
Nkx1-2P42580 AC131690.1-201ENSMUST00000218406 374 ntBASIC17.09■□□□□ 0.33
Nkx1-2P42580 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx1-2P42580 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx1-2P42580 Gm44891-201ENSMUST00000208817 2223 ntBASIC17.09■□□□□ 0.33
Nkx1-2P42580 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx1-2P42580 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC17.09■□□□□ 0.33
Nkx1-2P42580 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx1-2P42580 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx1-2P42580 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC17.09■□□□□ 0.33
Nkx1-2P42580 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx1-2P42580 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Nkx1-2P42580 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nkx1-2P42580 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nkx1-2P42580 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nkx1-2P42580 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nkx1-2P42580 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nkx1-2P42580 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nkx1-2P42580 Gm45242-201ENSMUST00000210666 2129 ntBASIC17.08■□□□□ 0.33
Nkx1-2P42580 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nkx1-2P42580 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nkx1-2P42580 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC17.08■□□□□ 0.33
Nkx1-2P42580 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nkx1-2P42580 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx1-2P42580 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms