Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox6P40645 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sox6P40645 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sox6P40645 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.08□□□□□ -0.31
Sox6P40645 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sox6P40645 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox6P40645 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox6P40645 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox6P40645 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox6P40645 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox6P40645 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox6P40645 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox6P40645 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox6P40645 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox6P40645 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Sox6P40645 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox6P40645 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox6P40645 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.08□□□□□ -0.32
Sox6P40645 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox6P40645 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox6P40645 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.08□□□□□ -0.32
Sox6P40645 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.08□□□□□ -0.32
Sox6P40645 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Sox6P40645 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.08□□□□□ -0.32
Sox6P40645 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.08□□□□□ -0.32
Sox6P40645 Gm45098-201ENSMUST00000207179 657 ntBASIC13.08□□□□□ -0.32
Sox6P40645 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Sox6P40645 Gm18041-201ENSMUST00000218210 618 ntBASIC13.08□□□□□ -0.32
Sox6P40645 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox6P40645 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox6P40645 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Sox6P40645 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox6P40645 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox6P40645 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Sox6P40645 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox6P40645 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox6P40645 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox6P40645 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox6P40645 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
Sox6P40645 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Sox6P40645 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.08□□□□□ -0.32
Sox6P40645 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox6P40645 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox6P40645 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox6P40645 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox6P40645 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox6P40645 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox6P40645 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox6P40645 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sox6P40645 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox6P40645 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sox6P40645 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sox6P40645 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox6P40645 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sox6P40645 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox6P40645 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Sox6P40645 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sox6P40645 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox6P40645 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sox6P40645 Gm13365-201ENSMUST00000121188 973 ntBASIC13.07□□□□□ -0.32
Sox6P40645 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.07□□□□□ -0.32
Sox6P40645 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.07□□□□□ -0.32
Sox6P40645 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.07□□□□□ -0.32
Sox6P40645 Gm18889-201ENSMUST00000174284 929 ntBASIC13.07□□□□□ -0.32
Sox6P40645 Gm43575-201ENSMUST00000196420 516 ntBASIC13.07□□□□□ -0.32
Sox6P40645 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.07□□□□□ -0.32
Sox6P40645 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.07□□□□□ -0.32
Sox6P40645 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sox6P40645 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox6P40645 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox6P40645 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox6P40645 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sox6P40645 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sox6P40645 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox6P40645 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox6P40645 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox6P40645 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.07□□□□□ -0.32
Sox6P40645 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.07□□□□□ -0.32
Sox6P40645 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox6P40645 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox6P40645 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox6P40645 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox6P40645 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox6P40645 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox6P40645 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox6P40645 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox6P40645 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox6P40645 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.06□□□□□ -0.32
Sox6P40645 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox6P40645 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.06□□□□□ -0.32
Sox6P40645 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox6P40645 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox6P40645 Gm5479-201ENSMUST00000160578 435 ntBASIC13.06□□□□□ -0.32
Sox6P40645 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox6P40645 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox6P40645 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Sox6P40645 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox6P40645 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox6P40645 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox6P40645 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms