Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.25□□□□□ -0.13
Mmp13P33435 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp13P33435 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp13P33435 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp13P33435 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Mmp13P33435 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp13P33435 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.25□□□□□ -0.13
Mmp13P33435 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Mmp13P33435 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Mmp13P33435 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Mmp13P33435 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp13P33435 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Mmp13P33435 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp13P33435 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
Mmp13P33435 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.25□□□□□ -0.13
Mmp13P33435 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.25□□□□□ -0.13
Mmp13P33435 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.25□□□□□ -0.13
Mmp13P33435 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.25□□□□□ -0.13
Mmp13P33435 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.25□□□□□ -0.13
Mmp13P33435 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.25□□□□□ -0.13
Mmp13P33435 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp13P33435 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.25□□□□□ -0.13
Mmp13P33435 Gm5779-201ENSMUST00000218467 910 ntBASIC14.25□□□□□ -0.13
Mmp13P33435 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp13P33435 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp13P33435 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp13P33435 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.25□□□□□ -0.13
Mmp13P33435 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp13P33435 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp13P33435 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp13P33435 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp13P33435 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp13P33435 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp13P33435 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp13P33435 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp13P33435 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp13P33435 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp13P33435 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp13P33435 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp13P33435 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp13P33435 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp13P33435 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Mmp13P33435 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp13P33435 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Mmp13P33435 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
Mmp13P33435 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp13P33435 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp13P33435 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Mmp13P33435 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp13P33435 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp13P33435 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp13P33435 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp13P33435 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Mmp13P33435 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.24□□□□□ -0.13
Mmp13P33435 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Mmp13P33435 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp13P33435 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.24□□□□□ -0.13
Mmp13P33435 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp13P33435 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp13P33435 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp13P33435 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Mmp13P33435 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp13P33435 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Mmp13P33435 Gm22175-201ENSMUST00000175007 78 ntBASIC14.24□□□□□ -0.13
Mmp13P33435 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.24□□□□□ -0.13
Mmp13P33435 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.24□□□□□ -0.13
Mmp13P33435 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.24□□□□□ -0.13
Mmp13P33435 Gm18049-201ENSMUST00000208909 581 ntBASIC14.24□□□□□ -0.13
Mmp13P33435 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.24□□□□□ -0.13
Mmp13P33435 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.24□□□□□ -0.13
Mmp13P33435 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.24□□□□□ -0.13
Mmp13P33435 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.24□□□□□ -0.13
Mmp13P33435 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.24□□□□□ -0.13
Mmp13P33435 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp13P33435 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Mmp13P33435 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp13P33435 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp13P33435 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp13P33435 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp13P33435 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp13P33435 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Mmp13P33435 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp13P33435 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Mmp13P33435 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mmp13P33435 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Mmp13P33435 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp13P33435 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp13P33435 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.23□□□□□ -0.13
Mmp13P33435 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp13P33435 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.23□□□□□ -0.13
Mmp13P33435 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp13P33435 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Mmp13P33435 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Mmp13P33435 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp13P33435 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.23□□□□□ -0.13
Mmp13P33435 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp13P33435 Gm12882-201ENSMUST00000121696 517 ntBASIC14.23□□□□□ -0.13
Mmp13P33435 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp13P33435 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Mmp13P33435 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms