Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp3P28862 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp3P28862 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp3P28862 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp3P28862 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp3P28862 Gm15371-201ENSMUST00000117057 784 ntBASIC14.85□□□□□ -0.03
Mmp3P28862 Gm12390-201ENSMUST00000117897 397 ntBASIC14.85□□□□□ -0.03
Mmp3P28862 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.85□□□□□ -0.03
Mmp3P28862 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp3P28862 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp3P28862 Gm38223-201ENSMUST00000194484 695 ntBASIC14.85□□□□□ -0.03
Mmp3P28862 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.85□□□□□ -0.03
Mmp3P28862 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp3P28862 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp3P28862 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.85□□□□□ -0.03
Mmp3P28862 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.85□□□□□ -0.03
Mmp3P28862 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp3P28862 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp3P28862 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp3P28862 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.85□□□□□ -0.03
Mmp3P28862 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp3P28862 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp3P28862 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp3P28862 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Mmp3P28862 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.85□□□□□ -0.03
Mmp3P28862 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Mmp3P28862 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp3P28862 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp3P28862 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp3P28862 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp3P28862 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Mmp3P28862 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp3P28862 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp3P28862 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Mmp3P28862 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp3P28862 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.84□□□□□ -0.03
Mmp3P28862 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.84□□□□□ -0.03
Mmp3P28862 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.84□□□□□ -0.03
Mmp3P28862 Gm27486-201ENSMUST00000184923 80 ntBASIC14.84□□□□□ -0.03
Mmp3P28862 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.84□□□□□ -0.03
Mmp3P28862 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Mmp3P28862 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.84□□□□□ -0.03
Mmp3P28862 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp3P28862 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Mmp3P28862 Gm5161-201ENSMUST00000075243 853 ntBASIC14.84□□□□□ -0.03
Mmp3P28862 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp3P28862 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp3P28862 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp3P28862 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp3P28862 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp3P28862 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp3P28862 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp3P28862 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.84□□□□□ -0.03
Mmp3P28862 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp3P28862 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp3P28862 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp3P28862 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Mmp3P28862 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp3P28862 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp3P28862 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.84□□□□□ -0.03
Mmp3P28862 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Mmp3P28862 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Mmp3P28862 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Mmp3P28862 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Mmp3P28862 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Mmp3P28862 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Mmp3P28862 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Mmp3P28862 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Mmp3P28862 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Mmp3P28862 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Mmp3P28862 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.83□□□□□ -0.04
Mmp3P28862 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.83□□□□□ -0.04
Mmp3P28862 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Mmp3P28862 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Mmp3P28862 Gm44397-201ENSMUST00000195950 113 ntBASIC14.83□□□□□ -0.04
Mmp3P28862 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Mmp3P28862 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Mmp3P28862 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Mmp3P28862 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Mmp3P28862 Gm24447-201ENSMUST00000083977 338 ntBASIC14.83□□□□□ -0.04
Mmp3P28862 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Mmp3P28862 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.83□□□□□ -0.04
Mmp3P28862 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Mmp3P28862 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Mmp3P28862 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Mmp3P28862 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Mmp3P28862 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Mmp3P28862 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Mmp3P28862 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Mmp3P28862 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Mmp3P28862 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Mmp3P28862 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Mmp3P28862 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Mmp3P28862 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Mmp3P28862 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Mmp3P28862 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Mmp3P28862 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Mmp3P28862 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Mmp3P28862 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Mmp3P28862 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms