Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl6P27784 AC121801.1-201ENSMUST00000225363 1899 ntBASIC10.87□□□□□ -0.67
Ccl6P27784 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl6P27784 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl6P27784 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ccl6P27784 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl6P27784 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Ccl6P27784 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccl6P27784 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl6P27784 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl6P27784 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl6P27784 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl6P27784 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC10.86□□□□□ -0.67
Ccl6P27784 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Ccl6P27784 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl6P27784 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl6P27784 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl6P27784 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl6P27784 Il17rd-203ENSMUST00000225146 3366 ntBASIC10.86□□□□□ -0.67
Ccl6P27784 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl6P27784 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Ccl6P27784 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl6P27784 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl6P27784 Gm6415-201ENSMUST00000118488 348 ntBASIC10.86□□□□□ -0.67
Ccl6P27784 Gm12882-201ENSMUST00000121696 517 ntBASIC10.86□□□□□ -0.67
Ccl6P27784 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl6P27784 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC10.86□□□□□ -0.67
Ccl6P27784 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl6P27784 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC10.86□□□□□ -0.67
Ccl6P27784 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl6P27784 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl6P27784 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Ccl6P27784 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl6P27784 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC10.86□□□□□ -0.67
Ccl6P27784 Gm10253-201ENSMUST00000194270 940 ntBASIC10.86□□□□□ -0.67
Ccl6P27784 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC10.86□□□□□ -0.67
Ccl6P27784 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC10.86□□□□□ -0.67
Ccl6P27784 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Ccl6P27784 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC10.86□□□□□ -0.67
Ccl6P27784 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl6P27784 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC10.86□□□□□ -0.67
Ccl6P27784 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl6P27784 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl6P27784 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl6P27784 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Ccl6P27784 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl6P27784 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Ccl6P27784 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Gm19863-201ENSMUST00000192480 2218 ntBASIC10.85□□□□□ -0.67
Ccl6P27784 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Ccl6P27784 Gm9109-201ENSMUST00000120254 1405 ntBASIC10.85□□□□□ -0.67
Ccl6P27784 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.85□□□□□ -0.67
Ccl6P27784 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Ccl6P27784 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Ccl6P27784 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Ccl6P27784 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Gm9719-201ENSMUST00000162765 543 ntBASIC10.85□□□□□ -0.67
Ccl6P27784 Gm25948-201ENSMUST00000175334 112 ntBASIC10.85□□□□□ -0.67
Ccl6P27784 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Ccl6P27784 Mir125a-201ENSMUST00000083545 68 ntBASIC10.85□□□□□ -0.67
Ccl6P27784 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC10.85□□□□□ -0.67
Ccl6P27784 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Ccl6P27784 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Gm13517-201ENSMUST00000120782 1495 ntBASIC10.85□□□□□ -0.67
Ccl6P27784 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Gm45751-201ENSMUST00000210185 1573 ntBASIC10.85□□□□□ -0.67
Ccl6P27784 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl6P27784 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms