Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Mir7654-201ENSMUST00000185082 70 ntBASIC14.29□□□□□ -0.12
Nfkb1P25799 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.29□□□□□ -0.12
Nfkb1P25799 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nfkb1P25799 Gm3222-201ENSMUST00000071282 990 ntBASIC14.29□□□□□ -0.12
Nfkb1P25799 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nfkb1P25799 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nfkb1P25799 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nfkb1P25799 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nfkb1P25799 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nfkb1P25799 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nfkb1P25799 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nfkb1P25799 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nfkb1P25799 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nfkb1P25799 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nfkb1P25799 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.29□□□□□ -0.12
Nfkb1P25799 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nfkb1P25799 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nfkb1P25799 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nfkb1P25799 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.28□□□□□ -0.12
Nfkb1P25799 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nfkb1P25799 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nfkb1P25799 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nfkb1P25799 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nfkb1P25799 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nfkb1P25799 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nfkb1P25799 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nfkb1P25799 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nfkb1P25799 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nfkb1P25799 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nfkb1P25799 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.28□□□□□ -0.12
Nfkb1P25799 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nfkb1P25799 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nfkb1P25799 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.28□□□□□ -0.12
Nfkb1P25799 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nfkb1P25799 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.28□□□□□ -0.12
Nfkb1P25799 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.28□□□□□ -0.12
Nfkb1P25799 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.28□□□□□ -0.12
Nfkb1P25799 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.28□□□□□ -0.12
Nfkb1P25799 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.28□□□□□ -0.12
Nfkb1P25799 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nfkb1P25799 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nfkb1P25799 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.28□□□□□ -0.12
Nfkb1P25799 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nfkb1P25799 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nfkb1P25799 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nfkb1P25799 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nfkb1P25799 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nfkb1P25799 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nfkb1P25799 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nfkb1P25799 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nfkb1P25799 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nfkb1P25799 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nfkb1P25799 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nfkb1P25799 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nfkb1P25799 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nfkb1P25799 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nfkb1P25799 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nfkb1P25799 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Nfkb1P25799 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.27□□□□□ -0.12
Nfkb1P25799 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nfkb1P25799 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nfkb1P25799 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nfkb1P25799 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nfkb1P25799 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nfkb1P25799 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nfkb1P25799 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nfkb1P25799 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nfkb1P25799 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.27□□□□□ -0.12
Nfkb1P25799 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nfkb1P25799 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.27□□□□□ -0.12
Nfkb1P25799 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nfkb1P25799 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.27□□□□□ -0.12
Nfkb1P25799 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nfkb1P25799 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nfkb1P25799 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Nfkb1P25799 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nfkb1P25799 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nfkb1P25799 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nfkb1P25799 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nfkb1P25799 Gm27701-201ENSMUST00000184498 110 ntBASIC14.27□□□□□ -0.13
Nfkb1P25799 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.27□□□□□ -0.13
Nfkb1P25799 Gm18307-201ENSMUST00000206864 949 ntBASIC14.27□□□□□ -0.13
Nfkb1P25799 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.27□□□□□ -0.13
Nfkb1P25799 Mir497b-201ENSMUST00000093601 125 ntBASIC14.27□□□□□ -0.13
Nfkb1P25799 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.27□□□□□ -0.13
Nfkb1P25799 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nfkb1P25799 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nfkb1P25799 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Nfkb1P25799 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nfkb1P25799 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nfkb1P25799 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nfkb1P25799 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nfkb1P25799 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nfkb1P25799 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nfkb1P25799 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nfkb1P25799 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.26□□□□□ -0.13
Nfkb1P25799 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.26□□□□□ -0.13
Nfkb1P25799 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nfkb1P25799 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nfkb1P25799 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms