Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Col8a2P25318 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col8a2P25318 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col8a2P25318 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.62□□□□□ -0.55
Col8a2P25318 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col8a2P25318 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Col8a2P25318 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col8a2P25318 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col8a2P25318 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col8a2P25318 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col8a2P25318 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col8a2P25318 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.61□□□□□ -0.55
Col8a2P25318 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col8a2P25318 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col8a2P25318 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Col8a2P25318 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col8a2P25318 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.61□□□□□ -0.55
Col8a2P25318 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col8a2P25318 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col8a2P25318 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Col8a2P25318 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Col8a2P25318 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col8a2P25318 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col8a2P25318 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Col8a2P25318 Gm12091-201ENSMUST00000146791 830 ntBASIC11.61□□□□□ -0.55
Col8a2P25318 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
Col8a2P25318 Gm28631-201ENSMUST00000190740 334 ntBASIC11.61□□□□□ -0.55
Col8a2P25318 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col8a2P25318 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col8a2P25318 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Col8a2P25318 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col8a2P25318 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Col8a2P25318 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Col8a2P25318 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col8a2P25318 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col8a2P25318 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col8a2P25318 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Col8a2P25318 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col8a2P25318 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col8a2P25318 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.6□□□□□ -0.55
Col8a2P25318 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col8a2P25318 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col8a2P25318 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Col8a2P25318 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col8a2P25318 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Col8a2P25318 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col8a2P25318 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col8a2P25318 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col8a2P25318 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col8a2P25318 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.6□□□□□ -0.55
Col8a2P25318 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Col8a2P25318 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col8a2P25318 Gm13385-201ENSMUST00000121089 220 ntBASIC11.6□□□□□ -0.55
Col8a2P25318 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col8a2P25318 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.6□□□□□ -0.55
Col8a2P25318 Mir6392-201ENSMUST00000184924 108 ntBASIC11.6□□□□□ -0.55
Col8a2P25318 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col8a2P25318 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col8a2P25318 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col8a2P25318 Gm18624-201ENSMUST00000220966 658 ntBASIC11.6□□□□□ -0.55
Col8a2P25318 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Col8a2P25318 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col8a2P25318 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Col8a2P25318 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.6□□□□□ -0.55
Col8a2P25318 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.6□□□□□ -0.55
Col8a2P25318 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.6□□□□□ -0.55
Col8a2P25318 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col8a2P25318 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col8a2P25318 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Col8a2P25318 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.6□□□□□ -0.55
Col8a2P25318 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Col8a2P25318 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Col8a2P25318 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col8a2P25318 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col8a2P25318 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Col8a2P25318 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.59□□□□□ -0.55
Col8a2P25318 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.59□□□□□ -0.55
Col8a2P25318 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.59□□□□□ -0.55
Col8a2P25318 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Col8a2P25318 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.59□□□□□ -0.55
Col8a2P25318 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.59□□□□□ -0.55
Col8a2P25318 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.59□□□□□ -0.55
Col8a2P25318 Gm12341-201ENSMUST00000119724 503 ntBASIC11.59□□□□□ -0.55
Col8a2P25318 Gm15376-201ENSMUST00000122258 783 ntBASIC11.59□□□□□ -0.55
Col8a2P25318 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.59□□□□□ -0.55
Col8a2P25318 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col8a2P25318 Gm45668-201ENSMUST00000211271 493 ntBASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms