Protein–RNA interactions for Protein: P12399

Ctla2a, Protein CTLA-2-alpha, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2aP12399 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ctla2aP12399 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ctla2aP12399 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ctla2aP12399 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ctla2aP12399 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ctla2aP12399 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Ctla2aP12399 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ctla2aP12399 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ctla2aP12399 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ctla2aP12399 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ctla2aP12399 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ctla2aP12399 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ctla2aP12399 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ctla2aP12399 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ctla2aP12399 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Ctla2aP12399 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ctla2aP12399 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ctla2aP12399 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ctla2aP12399 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ctla2aP12399 Gm14859-201ENSMUST00000117752 357 ntBASIC12.52□□□□□ -0.41
Ctla2aP12399 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ctla2aP12399 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.52□□□□□ -0.41
Ctla2aP12399 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.52□□□□□ -0.41
Ctla2aP12399 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ctla2aP12399 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Ctla2aP12399 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.52□□□□□ -0.41
Ctla2aP12399 Gm37153-201ENSMUST00000193637 231 ntBASIC12.52□□□□□ -0.41
Ctla2aP12399 Gm37230-201ENSMUST00000194491 818 ntBASIC12.52□□□□□ -0.41
Ctla2aP12399 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.52□□□□□ -0.41
Ctla2aP12399 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ctla2aP12399 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ctla2aP12399 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ctla2aP12399 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ctla2aP12399 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.52□□□□□ -0.41
Ctla2aP12399 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ctla2aP12399 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.52□□□□□ -0.41
Ctla2aP12399 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ctla2aP12399 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ctla2aP12399 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ctla2aP12399 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Ctla2aP12399 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ctla2aP12399 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ctla2aP12399 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ctla2aP12399 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ctla2aP12399 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.51□□□□□ -0.41
Ctla2aP12399 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ctla2aP12399 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ctla2aP12399 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.51□□□□□ -0.41
Ctla2aP12399 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ctla2aP12399 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ctla2aP12399 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ctla2aP12399 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ctla2aP12399 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ctla2aP12399 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ctla2aP12399 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ctla2aP12399 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ctla2aP12399 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Ctla2aP12399 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ctla2aP12399 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ctla2aP12399 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Ctla2aP12399 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ctla2aP12399 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ctla2aP12399 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ctla2aP12399 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.51□□□□□ -0.41
Ctla2aP12399 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.51□□□□□ -0.41
Ctla2aP12399 Gm18246-201ENSMUST00000221023 728 ntBASIC12.51□□□□□ -0.41
Ctla2aP12399 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.51□□□□□ -0.41
Ctla2aP12399 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ctla2aP12399 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ctla2aP12399 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ctla2aP12399 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ctla2aP12399 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.51□□□□□ -0.41
Ctla2aP12399 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ctla2aP12399 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ctla2aP12399 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.51□□□□□ -0.41
Ctla2aP12399 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ctla2aP12399 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.51□□□□□ -0.41
Ctla2aP12399 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ctla2aP12399 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ctla2aP12399 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.51□□□□□ -0.41
Ctla2aP12399 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ctla2aP12399 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ctla2aP12399 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ctla2aP12399 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ctla2aP12399 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ctla2aP12399 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ctla2aP12399 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ctla2aP12399 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ctla2aP12399 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ctla2aP12399 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ctla2aP12399 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ctla2aP12399 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ctla2aP12399 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ctla2aP12399 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ctla2aP12399 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ctla2aP12399 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ctla2aP12399 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ctla2aP12399 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ctla2aP12399 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ctla2aP12399 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms