Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl1P10146 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ccl1P10146 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl1P10146 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl1P10146 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl1P10146 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl1P10146 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl1P10146 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl1P10146 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl1P10146 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl1P10146 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl1P10146 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl1P10146 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC10.78□□□□□ -0.68
Ccl1P10146 Gm5682-201ENSMUST00000173402 505 ntBASIC10.78□□□□□ -0.68
Ccl1P10146 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC10.78□□□□□ -0.68
Ccl1P10146 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC10.78□□□□□ -0.68
Ccl1P10146 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl1P10146 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl1P10146 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl1P10146 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl1P10146 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl1P10146 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl1P10146 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl1P10146 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl1P10146 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl1P10146 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl1P10146 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC10.78□□□□□ -0.68
Ccl1P10146 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.78□□□□□ -0.68
Ccl1P10146 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl1P10146 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl1P10146 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl1P10146 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ccl1P10146 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC10.78□□□□□ -0.68
Ccl1P10146 Gm10729-202ENSMUST00000193403 1375 ntBASIC10.77□□□□□ -0.68
Ccl1P10146 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.68
Ccl1P10146 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC10.77□□□□□ -0.68
Ccl1P10146 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.77□□□□□ -0.68
Ccl1P10146 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ccl1P10146 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Ccl1P10146 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl1P10146 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl1P10146 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl1P10146 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl1P10146 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl1P10146 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl1P10146 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl1P10146 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl1P10146 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl1P10146 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Ccl1P10146 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Ccl1P10146 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Ccl1P10146 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl1P10146 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC10.77□□□□□ -0.69
Ccl1P10146 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Ccl1P10146 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC10.77□□□□□ -0.69
Ccl1P10146 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC10.77□□□□□ -0.69
Ccl1P10146 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl1P10146 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl1P10146 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl1P10146 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl1P10146 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Ccl1P10146 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl1P10146 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl1P10146 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Ccl1P10146 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Ccl1P10146 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl1P10146 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl1P10146 Best4-ps-201ENSMUST00000129783 1380 ntBASIC10.77□□□□□ -0.69
Ccl1P10146 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl1P10146 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccl1P10146 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Ccl1P10146 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 AC238940.1-201ENSMUST00000225106 1858 ntBASIC10.76□□□□□ -0.69
Ccl1P10146 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Ccl1P10146 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 Gm37500-201ENSMUST00000192059 1443 ntBASIC10.76□□□□□ -0.69
Ccl1P10146 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 Gm45638-201ENSMUST00000211507 2878 ntBASIC10.76□□□□□ -0.69
Ccl1P10146 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Ccl1P10146 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 AC126549.2-201ENSMUST00000223997 1976 ntBASIC10.76□□□□□ -0.69
Ccl1P10146 AC117194.1-201ENSMUST00000224847 3002 ntBASIC10.76□□□□□ -0.69
Ccl1P10146 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC10.76□□□□□ -0.69
Ccl1P10146 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Ccl1P10146 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Ccl1P10146 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl1P10146 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC10.76□□□□□ -0.69
Ccl1P10146 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms