Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Gm9347-201ENSMUST00000211473 1607 ntBASIC9.53□□□□□ -0.88
Smim1P0C8K7 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC9.53□□□□□ -0.88
Smim1P0C8K7 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Gm44454-201ENSMUST00000198541 138 ntBASIC9.53□□□□□ -0.88
Smim1P0C8K7 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Gm9109-201ENSMUST00000120254 1405 ntBASIC9.53□□□□□ -0.88
Smim1P0C8K7 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Gm43134-201ENSMUST00000199434 1886 ntBASIC9.53□□□□□ -0.88
Smim1P0C8K7 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC9.53□□□□□ -0.88
Smim1P0C8K7 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Smim1P0C8K7 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Smim1P0C8K7 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Smim1P0C8K7 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Smim1P0C8K7 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Smim1P0C8K7 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Smim1P0C8K7 Gm5837-201ENSMUST00000191844 1369 ntBASIC9.52□□□□□ -0.88
Smim1P0C8K7 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Smim1P0C8K7 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Smim1P0C8K7 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Smim1P0C8K7 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Smim1P0C8K7 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Smim1P0C8K7 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Gm6944-201ENSMUST00000182449 1006 ntBASIC9.52□□□□□ -0.89
Smim1P0C8K7 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Gm9182-201ENSMUST00000217829 639 ntBASIC9.52□□□□□ -0.89
Smim1P0C8K7 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
Smim1P0C8K7 CT009757.3-201ENSMUST00000223367 2320 ntBASIC9.52□□□□□ -0.89
Smim1P0C8K7 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smim1P0C8K7 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms