Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.91■□□□□ 0.46
Hoxc9P09633 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hoxc9P09633 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC17.91■□□□□ 0.46
Hoxc9P09633 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Hoxc9P09633 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hoxc9P09633 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hoxc9P09633 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hoxc9P09633 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Hoxc9P09633 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hoxc9P09633 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hoxc9P09633 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hoxc9P09633 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hoxc9P09633 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hoxc9P09633 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hoxc9P09633 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hoxc9P09633 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.9■□□□□ 0.46
Hoxc9P09633 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hoxc9P09633 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hoxc9P09633 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hoxc9P09633 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Hoxc9P09633 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hoxc9P09633 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Hoxc9P09633 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hoxc9P09633 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Hoxc9P09633 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hoxc9P09633 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hoxc9P09633 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hoxc9P09633 Gm12846-201ENSMUST00000120431 1373 ntBASIC17.9■□□□□ 0.46
Hoxc9P09633 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC17.9■□□□□ 0.46
Hoxc9P09633 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hoxc9P09633 Gm10040-201ENSMUST00000080726 1662 ntBASIC17.9■□□□□ 0.46
Hoxc9P09633 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Hoxc9P09633 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Hoxc9P09633 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hoxc9P09633 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Hoxc9P09633 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.89■□□□□ 0.45
Hoxc9P09633 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hoxc9P09633 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hoxc9P09633 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hoxc9P09633 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC17.89■□□□□ 0.45
Hoxc9P09633 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hoxc9P09633 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hoxc9P09633 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hoxc9P09633 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hoxc9P09633 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hoxc9P09633 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Hoxc9P09633 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hoxc9P09633 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC17.89■□□□□ 0.45
Hoxc9P09633 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hoxc9P09633 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hoxc9P09633 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC17.89■□□□□ 0.45
Hoxc9P09633 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hoxc9P09633 Mmp14-206ENSMUST00000225641 3238 ntBASIC17.89■□□□□ 0.45
Hoxc9P09633 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hoxc9P09633 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hoxc9P09633 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hoxc9P09633 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Hoxc9P09633 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Hoxc9P09633 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hoxc9P09633 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Hoxc9P09633 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC17.88■□□□□ 0.45
Hoxc9P09633 Gm13369-201ENSMUST00000119442 987 ntBASIC17.88■□□□□ 0.45
Hoxc9P09633 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC17.88■□□□□ 0.45
Hoxc9P09633 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC17.88■□□□□ 0.45
Hoxc9P09633 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC17.88■□□□□ 0.45
Hoxc9P09633 Mir8109-201ENSMUST00000184375 117 ntBASIC17.88■□□□□ 0.45
Hoxc9P09633 Gm38002-201ENSMUST00000193255 180 ntBASIC17.88■□□□□ 0.45
Hoxc9P09633 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC17.88■□□□□ 0.45
Hoxc9P09633 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hoxc9P09633 Gm9257-201ENSMUST00000221254 232 ntBASIC17.88■□□□□ 0.45
Hoxc9P09633 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC17.88■□□□□ 0.45
Hoxc9P09633 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hoxc9P09633 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hoxc9P09633 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hoxc9P09633 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hoxc9P09633 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Hoxc9P09633 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Hoxc9P09633 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hoxc9P09633 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
Hoxc9P09633 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hoxc9P09633 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hoxc9P09633 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hoxc9P09633 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
Hoxc9P09633 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hoxc9P09633 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Hoxc9P09633 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hoxc9P09633 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hoxc9P09633 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hoxc9P09633 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hoxc9P09633 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC17.87■□□□□ 0.45
Hoxc9P09633 Gm37497-201ENSMUST00000195830 798 ntBASIC17.87■□□□□ 0.45
Hoxc9P09633 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hoxc9P09633 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hoxc9P09633 Gm17823-201ENSMUST00000217830 1006 ntBASIC17.87■□□□□ 0.45
Hoxc9P09633 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hoxc9P09633 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hoxc9P09633 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hoxc9P09633 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hoxc9P09633 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.87■□□□□ 0.45
Hoxc9P09633 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms