Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC11.27□□□□□ -0.61
P06323 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.27□□□□□ -0.61
P06323 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.27□□□□□ -0.61
P06323 Gm20553-201ENSMUST00000204205 844 ntBASIC11.27□□□□□ -0.61
P06323 Gm18057-201ENSMUST00000208220 503 ntBASIC11.27□□□□□ -0.61
P06323 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.27□□□□□ -0.61
P06323 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.27□□□□□ -0.61
P06323 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
P06323 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
P06323 Grk6-205ENSMUST00000224653 2976 ntBASIC11.27□□□□□ -0.61
P06323 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
P06323 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.26□□□□□ -0.61
P06323 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.26□□□□□ -0.61
P06323 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
P06323 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
P06323 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.26□□□□□ -0.61
P06323 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC11.26□□□□□ -0.61
P06323 Gm38225-201ENSMUST00000194001 393 ntBASIC11.26□□□□□ -0.61
P06323 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.26□□□□□ -0.61
P06323 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC11.26□□□□□ -0.61
P06323 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.26□□□□□ -0.61
P06323 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.26□□□□□ -0.61
P06323 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.26□□□□□ -0.61
P06323 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.26□□□□□ -0.61
P06323 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
P06323 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
P06323 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
P06323 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
P06323 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06323 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06323 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06323 CT025626.1-201ENSMUST00000223735 1455 ntBASIC11.25□□□□□ -0.61
P06323 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06323 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06323 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06323 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06323 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06323 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
P06323 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P06323 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06323 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06323 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
P06323 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P06323 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms