Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.9□□□□□ -0.5
P04946 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04946 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P04946 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.9□□□□□ -0.5
P04946 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
P04946 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
P04946 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
P04946 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P04946 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04946 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P04946 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.9□□□□□ -0.5
P04946 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
P04946 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.9□□□□□ -0.5
P04946 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P04946 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P04946 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P04946 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.9□□□□□ -0.5
P04946 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04946 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P04946 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.9□□□□□ -0.5
P04946 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.9□□□□□ -0.5
P04946 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.9□□□□□ -0.5
P04946 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.9□□□□□ -0.5
P04946 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.9□□□□□ -0.5
P04946 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04946 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P04946 Gm5161-201ENSMUST00000075243 853 ntBASIC11.9□□□□□ -0.5
P04946 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04946 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
P04946 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
P04946 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
P04946 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
P04946 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
P04946 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
P04946 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.9□□□□□ -0.51
P04946 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.51
P04946 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
P04946 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
P04946 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.89□□□□□ -0.51
P04946 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 Gm15371-201ENSMUST00000117057 784 ntBASIC11.89□□□□□ -0.51
P04946 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.89□□□□□ -0.51
P04946 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
P04946 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.89□□□□□ -0.51
P04946 Gm15429-201ENSMUST00000151268 798 ntBASIC11.89□□□□□ -0.51
P04946 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
P04946 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 Gm2495-201ENSMUST00000191160 466 ntBASIC11.89□□□□□ -0.51
P04946 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.89□□□□□ -0.51
P04946 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.89□□□□□ -0.51
P04946 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
P04946 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
P04946 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
P04946 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
P04946 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
P04946 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P04946 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04946 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P04946 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04946 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P04946 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.88□□□□□ -0.51
P04946 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04946 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
P04946 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04946 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04946 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04946 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P04946 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
P04946 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.88□□□□□ -0.51
P04946 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.88□□□□□ -0.51
P04946 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P04946 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P04946 Gm38223-201ENSMUST00000194484 695 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms