Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm44069-201ENSMUST00000204898 506 ntBASIC16.79■□□□□ 0.28
Col4a1P02463 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a1P02463 Gm45865-201ENSMUST00000211815 945 ntBASIC16.79■□□□□ 0.28
Col4a1P02463 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC16.79■□□□□ 0.28
Col4a1P02463 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Col4a1P02463 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC16.79■□□□□ 0.28
Col4a1P02463 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a1P02463 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a1P02463 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a1P02463 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Col4a1P02463 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a1P02463 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a1P02463 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a1P02463 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Col4a1P02463 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.79■□□□□ 0.28
Col4a1P02463 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a1P02463 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a1P02463 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a1P02463 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC16.78■□□□□ 0.28
Col4a1P02463 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Col4a1P02463 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a1P02463 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a1P02463 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a1P02463 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a1P02463 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a1P02463 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.78■□□□□ 0.28
Col4a1P02463 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a1P02463 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a1P02463 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a1P02463 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a1P02463 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Col4a1P02463 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a1P02463 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a1P02463 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a1P02463 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a1P02463 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a1P02463 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a1P02463 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a1P02463 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Col4a1P02463 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
Col4a1P02463 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a1P02463 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.78■□□□□ 0.28
Col4a1P02463 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC16.78■□□□□ 0.28
Col4a1P02463 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a1P02463 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC16.78■□□□□ 0.28
Col4a1P02463 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a1P02463 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a1P02463 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a1P02463 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a1P02463 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a1P02463 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a1P02463 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a1P02463 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col4a1P02463 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col4a1P02463 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col4a1P02463 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Col4a1P02463 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col4a1P02463 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.77■□□□□ 0.28
Col4a1P02463 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col4a1P02463 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col4a1P02463 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col4a1P02463 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC16.77■□□□□ 0.28
Col4a1P02463 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col4a1P02463 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC16.77■□□□□ 0.28
Col4a1P02463 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC16.77■□□□□ 0.28
Col4a1P02463 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col4a1P02463 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC16.77■□□□□ 0.28
Col4a1P02463 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col4a1P02463 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC16.77■□□□□ 0.28
Col4a1P02463 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Col4a1P02463 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Col4a1P02463 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Col4a1P02463 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col4a1P02463 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Col4a1P02463 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col4a1P02463 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col4a1P02463 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col4a1P02463 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col4a1P02463 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col4a1P02463 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col4a1P02463 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Col4a1P02463 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Col4a1P02463 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Col4a1P02463 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col4a1P02463 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col4a1P02463 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col4a1P02463 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col4a1P02463 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col4a1P02463 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC16.76■□□□□ 0.27
Col4a1P02463 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC16.76■□□□□ 0.27
Col4a1P02463 AC159747.1-201ENSMUST00000219903 265 ntBASIC16.76■□□□□ 0.27
Col4a1P02463 AC022775.2-201ENSMUST00000227885 646 ntBASIC16.76■□□□□ 0.27
Col4a1P02463 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC16.76■□□□□ 0.27
Col4a1P02463 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col4a1P02463 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col4a1P02463 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col4a1P02463 AC139350.1-201ENSMUST00000227064 1594 ntBASIC16.76■□□□□ 0.27
Col4a1P02463 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col4a1P02463 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col4a1P02463 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms