Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Gm2445-201ENSMUST00000182798 989 ntBASIC18.05■□□□□ 0.48
Apaf1O88879 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Apaf1O88879 Gm15823-201ENSMUST00000064305 670 ntBASIC18.05■□□□□ 0.48
Apaf1O88879 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Apaf1O88879 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Apaf1O88879 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Apaf1O88879 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Apaf1O88879 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Apaf1O88879 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Apaf1O88879 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Apaf1O88879 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Apaf1O88879 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Apaf1O88879 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Apaf1O88879 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Apaf1O88879 Gm37015-201ENSMUST00000192763 1521 ntBASIC18.04■□□□□ 0.48
Apaf1O88879 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Apaf1O88879 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Apaf1O88879 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Apaf1O88879 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Apaf1O88879 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Apaf1O88879 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Apaf1O88879 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Apaf1O88879 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Apaf1O88879 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Apaf1O88879 Gm15678-201ENSMUST00000117573 960 ntBASIC18.04■□□□□ 0.48
Apaf1O88879 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC18.04■□□□□ 0.48
Apaf1O88879 Gm18018-201ENSMUST00000198273 408 ntBASIC18.04■□□□□ 0.48
Apaf1O88879 Gm9908-201ENSMUST00000211534 448 ntBASIC18.04■□□□□ 0.48
Apaf1O88879 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC18.04■□□□□ 0.48
Apaf1O88879 AC166997.1-201ENSMUST00000225122 572 ntBASIC18.04■□□□□ 0.48
Apaf1O88879 Arhgef33-209ENSMUST00000225223 714 ntBASIC18.04■□□□□ 0.48
Apaf1O88879 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Apaf1O88879 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Apaf1O88879 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Apaf1O88879 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Apaf1O88879 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Apaf1O88879 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Apaf1O88879 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC18.04■□□□□ 0.48
Apaf1O88879 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Apaf1O88879 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Apaf1O88879 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Apaf1O88879 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Apaf1O88879 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Apaf1O88879 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Apaf1O88879 AC161252.3-201ENSMUST00000225465 1549 ntBASIC18.03■□□□□ 0.48
Apaf1O88879 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Apaf1O88879 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Apaf1O88879 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Apaf1O88879 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Apaf1O88879 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Apaf1O88879 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Apaf1O88879 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Apaf1O88879 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Apaf1O88879 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC18.03■□□□□ 0.48
Apaf1O88879 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC18.03■□□□□ 0.48
Apaf1O88879 Gm9794-201ENSMUST00000202370 423 ntBASIC18.03■□□□□ 0.48
Apaf1O88879 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Apaf1O88879 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Apaf1O88879 AC154687.2-201ENSMUST00000223853 640 ntBASIC18.03■□□□□ 0.48
Apaf1O88879 AC154239.3-201ENSMUST00000226933 674 ntBASIC18.03■□□□□ 0.48
Apaf1O88879 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Apaf1O88879 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Apaf1O88879 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Apaf1O88879 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Apaf1O88879 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC18.03■□□□□ 0.48
Apaf1O88879 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Apaf1O88879 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC18.03■□□□□ 0.48
Apaf1O88879 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Apaf1O88879 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Apaf1O88879 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Apaf1O88879 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Apaf1O88879 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Apaf1O88879 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Apaf1O88879 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Apaf1O88879 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Apaf1O88879 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Apaf1O88879 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Apaf1O88879 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Apaf1O88879 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Apaf1O88879 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Apaf1O88879 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Apaf1O88879 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Apaf1O88879 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Apaf1O88879 Gm6745-201ENSMUST00000199216 526 ntBASIC18.02■□□□□ 0.48
Apaf1O88879 Gm19078-201ENSMUST00000206311 727 ntBASIC18.02■□□□□ 0.48
Apaf1O88879 Gm19220-201ENSMUST00000222682 803 ntBASIC18.02■□□□□ 0.48
Apaf1O88879 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Apaf1O88879 AC159006.1-201ENSMUST00000226396 258 ntBASIC18.02■□□□□ 0.48
Apaf1O88879 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Apaf1O88879 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Apaf1O88879 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Apaf1O88879 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Apaf1O88879 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Apaf1O88879 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Apaf1O88879 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Apaf1O88879 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Apaf1O88879 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Apaf1O88879 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC18.01■□□□□ 0.47
Apaf1O88879 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Apaf1O88879 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 155.5 ms