Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hcn1O88704 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hcn1O88704 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hcn1O88704 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.36□□□□□ -0.27
Hcn1O88704 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hcn1O88704 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hcn1O88704 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hcn1O88704 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.36□□□□□ -0.27
Hcn1O88704 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.36□□□□□ -0.27
Hcn1O88704 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hcn1O88704 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hcn1O88704 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Hcn1O88704 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hcn1O88704 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.36□□□□□ -0.27
Hcn1O88704 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hcn1O88704 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Hcn1O88704 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hcn1O88704 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hcn1O88704 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hcn1O88704 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.36□□□□□ -0.27
Hcn1O88704 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hcn1O88704 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Hcn1O88704 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hcn1O88704 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcn1O88704 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Hcn1O88704 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Hcn1O88704 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Hcn1O88704 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcn1O88704 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcn1O88704 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Hcn1O88704 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcn1O88704 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcn1O88704 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Hcn1O88704 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hcn1O88704 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcn1O88704 AA543401-201ENSMUST00000164248 1269 ntBASIC13.35□□□□□ -0.27
Hcn1O88704 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcn1O88704 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.35□□□□□ -0.27
Hcn1O88704 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.35□□□□□ -0.27
Hcn1O88704 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcn1O88704 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcn1O88704 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Hcn1O88704 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hcn1O88704 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcn1O88704 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcn1O88704 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcn1O88704 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcn1O88704 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.35□□□□□ -0.27
Hcn1O88704 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcn1O88704 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Hcn1O88704 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcn1O88704 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcn1O88704 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Hcn1O88704 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.35□□□□□ -0.27
Hcn1O88704 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcn1O88704 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcn1O88704 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hcn1O88704 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Hcn1O88704 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcn1O88704 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcn1O88704 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
Hcn1O88704 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcn1O88704 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Hcn1O88704 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcn1O88704 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Hcn1O88704 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcn1O88704 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hcn1O88704 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcn1O88704 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcn1O88704 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.34□□□□□ -0.27
Hcn1O88704 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.34□□□□□ -0.27
Hcn1O88704 Gm8410-201ENSMUST00000117225 605 ntBASIC13.34□□□□□ -0.27
Hcn1O88704 Gm13823-201ENSMUST00000119930 345 ntBASIC13.34□□□□□ -0.27
Hcn1O88704 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcn1O88704 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Hcn1O88704 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hcn1O88704 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcn1O88704 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcn1O88704 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hcn1O88704 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcn1O88704 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcn1O88704 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hcn1O88704 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcn1O88704 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hcn1O88704 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcn1O88704 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcn1O88704 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcn1O88704 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Hcn1O88704 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Hcn1O88704 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcn1O88704 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcn1O88704 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hcn1O88704 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcn1O88704 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hcn1O88704 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hcn1O88704 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hcn1O88704 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hcn1O88704 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hcn1O88704 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hcn1O88704 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms