Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Lmx1bO88609 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lmx1bO88609 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lmx1bO88609 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lmx1bO88609 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lmx1bO88609 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Lmx1bO88609 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lmx1bO88609 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.61□□□□□ -0.39
Lmx1bO88609 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmx1bO88609 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmx1bO88609 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmx1bO88609 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lmx1bO88609 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmx1bO88609 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
Lmx1bO88609 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lmx1bO88609 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lmx1bO88609 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmx1bO88609 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmx1bO88609 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lmx1bO88609 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmx1bO88609 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmx1bO88609 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Lmx1bO88609 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmx1bO88609 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lmx1bO88609 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmx1bO88609 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Lmx1bO88609 Gm12138-201ENSMUST00000122180 951 ntBASIC12.61□□□□□ -0.39
Lmx1bO88609 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.61□□□□□ -0.39
Lmx1bO88609 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.61□□□□□ -0.39
Lmx1bO88609 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.61□□□□□ -0.39
Lmx1bO88609 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.61□□□□□ -0.39
Lmx1bO88609 Gm37917-201ENSMUST00000194711 392 ntBASIC12.61□□□□□ -0.39
Lmx1bO88609 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.61□□□□□ -0.39
Lmx1bO88609 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.61□□□□□ -0.39
Lmx1bO88609 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmx1bO88609 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lmx1bO88609 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lmx1bO88609 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmx1bO88609 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.61□□□□□ -0.39
Lmx1bO88609 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmx1bO88609 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmx1bO88609 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lmx1bO88609 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lmx1bO88609 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Lmx1bO88609 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lmx1bO88609 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lmx1bO88609 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmx1bO88609 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmx1bO88609 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmx1bO88609 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmx1bO88609 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmx1bO88609 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmx1bO88609 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Lmx1bO88609 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmx1bO88609 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.6□□□□□ -0.39
Lmx1bO88609 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmx1bO88609 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmx1bO88609 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmx1bO88609 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lmx1bO88609 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmx1bO88609 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lmx1bO88609 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmx1bO88609 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmx1bO88609 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Lmx1bO88609 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
Lmx1bO88609 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.6□□□□□ -0.39
Lmx1bO88609 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lmx1bO88609 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.6□□□□□ -0.39
Lmx1bO88609 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lmx1bO88609 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.6□□□□□ -0.39
Lmx1bO88609 Gm21470-201ENSMUST00000187680 696 ntBASIC12.6□□□□□ -0.39
Lmx1bO88609 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.6□□□□□ -0.39
Lmx1bO88609 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.6□□□□□ -0.39
Lmx1bO88609 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Lmx1bO88609 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.6□□□□□ -0.39
Lmx1bO88609 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmx1bO88609 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmx1bO88609 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmx1bO88609 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.6□□□□□ -0.39
Lmx1bO88609 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lmx1bO88609 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lmx1bO88609 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmx1bO88609 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lmx1bO88609 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lmx1bO88609 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmx1bO88609 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Lmx1bO88609 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmx1bO88609 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.6□□□□□ -0.39
Lmx1bO88609 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmx1bO88609 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Lmx1bO88609 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.59□□□□□ -0.39
Lmx1bO88609 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.59□□□□□ -0.39
Lmx1bO88609 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmx1bO88609 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms