Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm38049-201ENSMUST00000195698 1372 ntBASIC17.72■□□□□ 0.43
Ubr1O70481 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubr1O70481 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC17.72■□□□□ 0.43
Ubr1O70481 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ubr1O70481 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubr1O70481 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubr1O70481 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.72■□□□□ 0.43
Ubr1O70481 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubr1O70481 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubr1O70481 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubr1O70481 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubr1O70481 Gm22323-201ENSMUST00000103832 109 ntBASIC17.71■□□□□ 0.43
Ubr1O70481 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ubr1O70481 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ubr1O70481 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubr1O70481 Gm18827-201ENSMUST00000188341 790 ntBASIC17.71■□□□□ 0.43
Ubr1O70481 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC17.71■□□□□ 0.43
Ubr1O70481 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubr1O70481 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubr1O70481 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubr1O70481 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubr1O70481 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ubr1O70481 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ubr1O70481 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ubr1O70481 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ubr1O70481 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubr1O70481 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubr1O70481 Gm2991-201ENSMUST00000173338 480 ntBASIC17.71■□□□□ 0.43
Ubr1O70481 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Ubr1O70481 Gm37042-201ENSMUST00000193816 581 ntBASIC17.71■□□□□ 0.43
Ubr1O70481 Gm7046-201ENSMUST00000221351 977 ntBASIC17.71■□□□□ 0.43
Ubr1O70481 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubr1O70481 Gm24526-201ENSMUST00000082921 158 ntBASIC17.71■□□□□ 0.43
Ubr1O70481 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ubr1O70481 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ubr1O70481 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ubr1O70481 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.71■□□□□ 0.42
Ubr1O70481 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ubr1O70481 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ubr1O70481 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ubr1O70481 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ubr1O70481 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC17.7■□□□□ 0.42
Ubr1O70481 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ubr1O70481 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ubr1O70481 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ubr1O70481 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ubr1O70481 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Ubr1O70481 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ubr1O70481 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC17.7■□□□□ 0.42
Ubr1O70481 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ubr1O70481 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ubr1O70481 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ubr1O70481 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Ubr1O70481 Gm13342-201ENSMUST00000121055 207 ntBASIC17.7■□□□□ 0.42
Ubr1O70481 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ubr1O70481 Gm6621-201ENSMUST00000193251 772 ntBASIC17.7■□□□□ 0.42
Ubr1O70481 Gm4959-201ENSMUST00000197271 1044 ntBASIC17.7■□□□□ 0.42
Ubr1O70481 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ubr1O70481 Gm45865-201ENSMUST00000211815 945 ntBASIC17.7■□□□□ 0.42
Ubr1O70481 Gm18935-201ENSMUST00000212692 664 ntBASIC17.7■□□□□ 0.42
Ubr1O70481 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ubr1O70481 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ubr1O70481 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ubr1O70481 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ubr1O70481 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ubr1O70481 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ubr1O70481 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubr1O70481 Gm18244-201ENSMUST00000219747 1566 ntBASIC17.69■□□□□ 0.42
Ubr1O70481 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubr1O70481 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubr1O70481 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubr1O70481 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubr1O70481 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.69■□□□□ 0.42
Ubr1O70481 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubr1O70481 Gm16379-201ENSMUST00000161469 348 ntBASIC17.69■□□□□ 0.42
Ubr1O70481 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC17.69■□□□□ 0.42
Ubr1O70481 Gm8762-201ENSMUST00000193486 339 ntBASIC17.69■□□□□ 0.42
Ubr1O70481 Gm32025-201ENSMUST00000217960 307 ntBASIC17.69■□□□□ 0.42
Ubr1O70481 AC173210.1-201ENSMUST00000222341 1131 ntBASIC17.69■□□□□ 0.42
Ubr1O70481 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubr1O70481 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubr1O70481 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubr1O70481 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubr1O70481 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubr1O70481 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubr1O70481 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ubr1O70481 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ubr1O70481 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC17.69■□□□□ 0.42
Ubr1O70481 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubr1O70481 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC17.69■□□□□ 0.42
Ubr1O70481 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Ubr1O70481 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubr1O70481 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubr1O70481 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubr1O70481 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubr1O70481 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubr1O70481 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Ubr1O70481 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubr1O70481 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ubr1O70481 Gm27243-201ENSMUST00000183964 521 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms