Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim1O70400 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim1O70400 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
Pdlim1O70400 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.75□□□□□ -0.21
Pdlim1O70400 Gm15240-201ENSMUST00000118156 720 ntBASIC13.75□□□□□ -0.21
Pdlim1O70400 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.75□□□□□ -0.21
Pdlim1O70400 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim1O70400 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.75□□□□□ -0.21
Pdlim1O70400 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.75□□□□□ -0.21
Pdlim1O70400 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.75□□□□□ -0.21
Pdlim1O70400 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.75□□□□□ -0.21
Pdlim1O70400 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.75□□□□□ -0.21
Pdlim1O70400 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim1O70400 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim1O70400 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim1O70400 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim1O70400 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim1O70400 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim1O70400 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.75□□□□□ -0.21
Pdlim1O70400 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim1O70400 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim1O70400 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim1O70400 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Pdlim1O70400 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim1O70400 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim1O70400 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim1O70400 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.74□□□□□ -0.21
Pdlim1O70400 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.74□□□□□ -0.21
Pdlim1O70400 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim1O70400 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim1O70400 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim1O70400 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.74□□□□□ -0.21
Pdlim1O70400 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim1O70400 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim1O70400 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim1O70400 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim1O70400 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim1O70400 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim1O70400 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim1O70400 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim1O70400 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim1O70400 Mir6977-201ENSMUST00000184960 64 ntBASIC13.74□□□□□ -0.21
Pdlim1O70400 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Pdlim1O70400 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim1O70400 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim1O70400 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim1O70400 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.74□□□□□ -0.21
Pdlim1O70400 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Pdlim1O70400 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim1O70400 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim1O70400 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Pdlim1O70400 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim1O70400 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim1O70400 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim1O70400 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim1O70400 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim1O70400 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim1O70400 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim1O70400 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim1O70400 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim1O70400 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Pdlim1O70400 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim1O70400 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim1O70400 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim1O70400 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.73□□□□□ -0.21
Pdlim1O70400 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim1O70400 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim1O70400 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim1O70400 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim1O70400 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim1O70400 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.73□□□□□ -0.21
Pdlim1O70400 Gm25925-201ENSMUST00000158314 306 ntBASIC13.73□□□□□ -0.21
Pdlim1O70400 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.73□□□□□ -0.21
Pdlim1O70400 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.73□□□□□ -0.21
Pdlim1O70400 Gm7730-201ENSMUST00000212486 454 ntBASIC13.73□□□□□ -0.21
Pdlim1O70400 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Pdlim1O70400 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim1O70400 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Pdlim1O70400 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim1O70400 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.73□□□□□ -0.21
Pdlim1O70400 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim1O70400 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.73□□□□□ -0.21
Pdlim1O70400 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim1O70400 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.73□□□□□ -0.21
Pdlim1O70400 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim1O70400 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim1O70400 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim1O70400 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim1O70400 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim1O70400 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.73□□□□□ -0.21
Pdlim1O70400 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim1O70400 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim1O70400 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim1O70400 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim1O70400 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim1O70400 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim1O70400 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Pdlim1O70400 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim1O70400 Gm22189-201ENSMUST00000103822 86 ntBASIC13.72□□□□□ -0.21
Pdlim1O70400 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms