Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgceO70258 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SgceO70258 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgceO70258 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SgceO70258 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgceO70258 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgceO70258 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgceO70258 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
SgceO70258 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.48□□□□□ -0.41
SgceO70258 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgceO70258 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgceO70258 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SgceO70258 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.48□□□□□ -0.41
SgceO70258 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgceO70258 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.48□□□□□ -0.41
SgceO70258 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.48□□□□□ -0.41
SgceO70258 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SgceO70258 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgceO70258 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.48□□□□□ -0.41
SgceO70258 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgceO70258 Gm18766-201ENSMUST00000189811 808 ntBASIC12.48□□□□□ -0.41
SgceO70258 Gm7774-201ENSMUST00000200064 533 ntBASIC12.48□□□□□ -0.41
SgceO70258 Gm5312-201ENSMUST00000203728 547 ntBASIC12.48□□□□□ -0.41
SgceO70258 Gm45453-201ENSMUST00000211758 853 ntBASIC12.48□□□□□ -0.41
SgceO70258 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.48□□□□□ -0.41
SgceO70258 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.48□□□□□ -0.41
SgceO70258 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
SgceO70258 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
SgceO70258 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgceO70258 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SgceO70258 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgceO70258 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgceO70258 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgceO70258 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SgceO70258 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
SgceO70258 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SgceO70258 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgceO70258 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
SgceO70258 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgceO70258 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
SgceO70258 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
SgceO70258 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.48□□□□□ -0.41
SgceO70258 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgceO70258 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgceO70258 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SgceO70258 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgceO70258 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.47□□□□□ -0.41
SgceO70258 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgceO70258 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
SgceO70258 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgceO70258 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SgceO70258 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgceO70258 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgceO70258 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgceO70258 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgceO70258 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgceO70258 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgceO70258 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
SgceO70258 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SgceO70258 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SgceO70258 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgceO70258 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
SgceO70258 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgceO70258 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgceO70258 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgceO70258 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SgceO70258 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.47□□□□□ -0.41
SgceO70258 Gm26308-201ENSMUST00000157768 69 ntBASIC12.47□□□□□ -0.41
SgceO70258 Gm9719-201ENSMUST00000162765 543 ntBASIC12.47□□□□□ -0.41
SgceO70258 Gm27631-201ENSMUST00000184163 466 ntBASIC12.47□□□□□ -0.41
SgceO70258 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgceO70258 Gm43575-201ENSMUST00000196420 516 ntBASIC12.47□□□□□ -0.41
SgceO70258 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.47□□□□□ -0.41
SgceO70258 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.47□□□□□ -0.41
SgceO70258 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgceO70258 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
SgceO70258 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
SgceO70258 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.47□□□□□ -0.41
SgceO70258 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgceO70258 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgceO70258 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgceO70258 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SgceO70258 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgceO70258 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
SgceO70258 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.47□□□□□ -0.41
SgceO70258 BC001981-202ENSMUST00000191393 1545 ntBASIC12.47□□□□□ -0.41
SgceO70258 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SgceO70258 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.47□□□□□ -0.41
SgceO70258 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.46□□□□□ -0.41
SgceO70258 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SgceO70258 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SgceO70258 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.46□□□□□ -0.41
SgceO70258 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SgceO70258 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SgceO70258 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SgceO70258 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.46□□□□□ -0.41
SgceO70258 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SgceO70258 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
SgceO70258 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SgceO70258 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms