Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cldn5O54942 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.42□□□□□ -0.1
Cldn5O54942 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn5O54942 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cldn5O54942 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.42□□□□□ -0.1
Cldn5O54942 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn5O54942 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn5O54942 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn5O54942 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.41□□□□□ -0.1
Cldn5O54942 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Cldn5O54942 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn5O54942 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn5O54942 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn5O54942 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn5O54942 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn5O54942 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn5O54942 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn5O54942 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.41□□□□□ -0.1
Cldn5O54942 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn5O54942 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn5O54942 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn5O54942 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn5O54942 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn5O54942 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn5O54942 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.41□□□□□ -0.1
Cldn5O54942 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn5O54942 Gm5186-201ENSMUST00000218781 920 ntBASIC14.41□□□□□ -0.1
Cldn5O54942 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.41□□□□□ -0.1
Cldn5O54942 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.41□□□□□ -0.1
Cldn5O54942 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn5O54942 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn5O54942 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn5O54942 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn5O54942 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn5O54942 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn5O54942 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn5O54942 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn5O54942 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn5O54942 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.41□□□□□ -0.1
Cldn5O54942 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn5O54942 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn5O54942 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.41□□□□□ -0.1
Cldn5O54942 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cldn5O54942 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn5O54942 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Cldn5O54942 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn5O54942 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.41□□□□□ -0.1
Cldn5O54942 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.4□□□□□ -0.1
Cldn5O54942 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cldn5O54942 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.4□□□□□ -0.1
Cldn5O54942 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.4□□□□□ -0.1
Cldn5O54942 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.4□□□□□ -0.1
Cldn5O54942 Gm15376-201ENSMUST00000122258 783 ntBASIC14.4□□□□□ -0.1
Cldn5O54942 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.4□□□□□ -0.1
Cldn5O54942 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.4□□□□□ -0.1
Cldn5O54942 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.4□□□□□ -0.1
Cldn5O54942 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.4□□□□□ -0.1
Cldn5O54942 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.4□□□□□ -0.1
Cldn5O54942 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.4□□□□□ -0.1
Cldn5O54942 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cldn5O54942 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cldn5O54942 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Cldn5O54942 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.4□□□□□ -0.1
Cldn5O54942 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Cldn5O54942 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.4□□□□□ -0.1
Cldn5O54942 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn5O54942 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cldn5O54942 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Cldn5O54942 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn5O54942 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn5O54942 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms