Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sdc4O35988 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sdc4O35988 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sdc4O35988 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sdc4O35988 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Sdc4O35988 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Sdc4O35988 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.31□□□□□ -0.12
Sdc4O35988 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sdc4O35988 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Sdc4O35988 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sdc4O35988 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sdc4O35988 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sdc4O35988 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.31□□□□□ -0.12
Sdc4O35988 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sdc4O35988 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sdc4O35988 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sdc4O35988 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sdc4O35988 Mir7654-201ENSMUST00000185082 70 ntBASIC14.31□□□□□ -0.12
Sdc4O35988 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.31□□□□□ -0.12
Sdc4O35988 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.31□□□□□ -0.12
Sdc4O35988 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.31□□□□□ -0.12
Sdc4O35988 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sdc4O35988 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.31□□□□□ -0.12
Sdc4O35988 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sdc4O35988 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sdc4O35988 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sdc4O35988 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sdc4O35988 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sdc4O35988 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sdc4O35988 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Sdc4O35988 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sdc4O35988 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sdc4O35988 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sdc4O35988 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sdc4O35988 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sdc4O35988 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sdc4O35988 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Sdc4O35988 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.31□□□□□ -0.12
Sdc4O35988 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sdc4O35988 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.31□□□□□ -0.12
Sdc4O35988 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sdc4O35988 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sdc4O35988 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sdc4O35988 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sdc4O35988 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Sdc4O35988 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sdc4O35988 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sdc4O35988 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sdc4O35988 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sdc4O35988 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sdc4O35988 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Sdc4O35988 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sdc4O35988 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sdc4O35988 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sdc4O35988 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Sdc4O35988 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sdc4O35988 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sdc4O35988 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.3□□□□□ -0.12
Sdc4O35988 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sdc4O35988 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.3□□□□□ -0.12
Sdc4O35988 Gm27701-201ENSMUST00000184498 110 ntBASIC14.3□□□□□ -0.12
Sdc4O35988 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sdc4O35988 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sdc4O35988 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sdc4O35988 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sdc4O35988 Mir497b-201ENSMUST00000093601 125 ntBASIC14.3□□□□□ -0.12
Sdc4O35988 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.3□□□□□ -0.12
Sdc4O35988 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.3□□□□□ -0.12
Sdc4O35988 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sdc4O35988 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sdc4O35988 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sdc4O35988 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sdc4O35988 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Sdc4O35988 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sdc4O35988 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sdc4O35988 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sdc4O35988 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sdc4O35988 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sdc4O35988 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sdc4O35988 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sdc4O35988 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc4O35988 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc4O35988 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc4O35988 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc4O35988 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sdc4O35988 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sdc4O35988 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc4O35988 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sdc4O35988 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc4O35988 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc4O35988 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc4O35988 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc4O35988 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc4O35988 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Sdc4O35988 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc4O35988 Mir698-201ENSMUST00000102164 109 ntBASIC14.29□□□□□ -0.12
Sdc4O35988 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sdc4O35988 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Sdc4O35988 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.29□□□□□ -0.12
Sdc4O35988 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms