Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Gm10576-201ENSMUST00000191927 825 ntBASIC12.12□□□□□ -0.47
Atf6bO35451 AA619741-201ENSMUST00000195095 646 ntBASIC12.12□□□□□ -0.47
Atf6bO35451 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.12□□□□□ -0.47
Atf6bO35451 Gm16476-201ENSMUST00000221544 139 ntBASIC12.12□□□□□ -0.47
Atf6bO35451 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6bO35451 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6bO35451 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6bO35451 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6bO35451 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Atf6bO35451 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6bO35451 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6bO35451 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6bO35451 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6bO35451 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6bO35451 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6bO35451 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.12□□□□□ -0.47
Atf6bO35451 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6bO35451 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Atf6bO35451 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6bO35451 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6bO35451 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Atf6bO35451 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6bO35451 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Atf6bO35451 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Atf6bO35451 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.11□□□□□ -0.47
Atf6bO35451 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.11□□□□□ -0.47
Atf6bO35451 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.11□□□□□ -0.47
Atf6bO35451 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.11□□□□□ -0.47
Atf6bO35451 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Atf6bO35451 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Gm14767-201ENSMUST00000121559 586 ntBASIC12.11□□□□□ -0.47
Atf6bO35451 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Atf6bO35451 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Atf6bO35451 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Atf6bO35451 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.11□□□□□ -0.47
Atf6bO35451 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Atf6bO35451 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Atf6bO35451 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Atf6bO35451 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Atf6bO35451 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6bO35451 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6bO35451 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6bO35451 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6bO35451 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6bO35451 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.1□□□□□ -0.47
Atf6bO35451 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.1□□□□□ -0.47
Atf6bO35451 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6bO35451 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6bO35451 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Atf6bO35451 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6bO35451 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6bO35451 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6bO35451 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6bO35451 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6bO35451 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6bO35451 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Atf6bO35451 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6bO35451 Gm27680-201ENSMUST00000184192 160 ntBASIC12.1□□□□□ -0.47
Atf6bO35451 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.1□□□□□ -0.47
Atf6bO35451 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6bO35451 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6bO35451 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.1□□□□□ -0.47
Atf6bO35451 Shd-206ENSMUST00000225145 998 ntBASIC12.1□□□□□ -0.47
Atf6bO35451 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.1□□□□□ -0.47
Atf6bO35451 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Atf6bO35451 Mir125a-201ENSMUST00000083545 68 ntBASIC12.1□□□□□ -0.47
Atf6bO35451 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
Atf6bO35451 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6bO35451 BC001981-202ENSMUST00000191393 1545 ntBASIC12.1□□□□□ -0.47
Atf6bO35451 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6bO35451 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms