Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Polr1aO35134 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Polr1aO35134 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC21■□□□□ 0.95
Polr1aO35134 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Polr1aO35134 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC21■□□□□ 0.95
Polr1aO35134 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Polr1aO35134 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Polr1aO35134 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Polr1aO35134 Gm15370-201ENSMUST00000117158 253 ntBASIC21■□□□□ 0.95
Polr1aO35134 Gm12749-201ENSMUST00000122138 1159 ntBASIC21■□□□□ 0.95
Polr1aO35134 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC21■□□□□ 0.95
Polr1aO35134 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Polr1aO35134 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Polr1aO35134 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Polr1aO35134 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Polr1aO35134 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Polr1aO35134 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Polr1aO35134 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC20.99■□□□□ 0.95
Polr1aO35134 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Polr1aO35134 Gm26185-201ENSMUST00000157692 266 ntBASIC20.99■□□□□ 0.95
Polr1aO35134 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Polr1aO35134 Gm27320-201ENSMUST00000184892 109 ntBASIC20.99■□□□□ 0.95
Polr1aO35134 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Polr1aO35134 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Polr1aO35134 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Polr1aO35134 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Polr1aO35134 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Polr1aO35134 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Polr1aO35134 Gm20482-202ENSMUST00000174729 825 ntBASIC20.98■□□□□ 0.95
Polr1aO35134 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Polr1aO35134 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Polr1aO35134 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Polr1aO35134 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Polr1aO35134 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Polr1aO35134 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Polr1aO35134 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC20.98■□□□□ 0.95
Polr1aO35134 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Polr1aO35134 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Polr1aO35134 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Polr1aO35134 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Polr1aO35134 Mir877-201ENSMUST00000104738 85 ntBASIC20.98■□□□□ 0.95
Polr1aO35134 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Polr1aO35134 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC20.98■□□□□ 0.95
Polr1aO35134 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Polr1aO35134 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC20.98■□□□□ 0.95
Polr1aO35134 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Polr1aO35134 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Polr1aO35134 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC20.98■□□□□ 0.95
Polr1aO35134 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Polr1aO35134 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Polr1aO35134 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
Polr1aO35134 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Polr1aO35134 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Polr1aO35134 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Polr1aO35134 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Polr1aO35134 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Polr1aO35134 AC101945.2-201ENSMUST00000227886 1377 ntBASIC20.97■□□□□ 0.95
Polr1aO35134 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Polr1aO35134 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Polr1aO35134 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Polr1aO35134 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Polr1aO35134 Gm24255-201ENSMUST00000104481 128 ntBASIC20.97■□□□□ 0.95
Polr1aO35134 Snord83b-201ENSMUST00000104546 94 ntBASIC20.97■□□□□ 0.95
Polr1aO35134 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC20.97■□□□□ 0.95
Polr1aO35134 Gm32025-201ENSMUST00000217960 307 ntBASIC20.97■□□□□ 0.95
Polr1aO35134 Gm19163-201ENSMUST00000223313 780 ntBASIC20.97■□□□□ 0.95
Polr1aO35134 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Polr1aO35134 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Polr1aO35134 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Polr1aO35134 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Polr1aO35134 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Polr1aO35134 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Polr1aO35134 Gm12620-201ENSMUST00000119791 1986 ntBASIC20.97■□□□□ 0.95
Polr1aO35134 Gm12612-201ENSMUST00000140182 1986 ntBASIC20.97■□□□□ 0.95
Polr1aO35134 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Polr1aO35134 Gm9867-201ENSMUST00000192212 2647 ntBASIC20.97■□□□□ 0.95
Polr1aO35134 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Polr1aO35134 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Polr1aO35134 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Polr1aO35134 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Polr1aO35134 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Polr1aO35134 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Polr1aO35134 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Polr1aO35134 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Polr1aO35134 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Polr1aO35134 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Polr1aO35134 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Polr1aO35134 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Polr1aO35134 Gm16425-201ENSMUST00000118143 3130 ntBASIC20.96■□□□□ 0.95
Polr1aO35134 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC20.96■□□□□ 0.95
Polr1aO35134 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC20.96■□□□□ 0.95
Polr1aO35134 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC20.96■□□□□ 0.95
Polr1aO35134 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC20.96■□□□□ 0.95
Polr1aO35134 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Polr1aO35134 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Polr1aO35134 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Polr1aO35134 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Polr1aO35134 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Polr1aO35134 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Polr1aO35134 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms