Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh9F8VPK8 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh9F8VPK8 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh9F8VPK8 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh9F8VPK8 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.27□□□□□ -0.12
Pcdh9F8VPK8 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.27□□□□□ -0.12
Pcdh9F8VPK8 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh9F8VPK8 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh9F8VPK8 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh9F8VPK8 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh9F8VPK8 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh9F8VPK8 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh9F8VPK8 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh9F8VPK8 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh9F8VPK8 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.27□□□□□ -0.13
Pcdh9F8VPK8 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh9F8VPK8 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.27□□□□□ -0.13
Pcdh9F8VPK8 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdh9F8VPK8 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.27□□□□□ -0.13
Pcdh9F8VPK8 Gm43575-201ENSMUST00000196420 516 ntBASIC14.27□□□□□ -0.13
Pcdh9F8VPK8 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh9F8VPK8 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdh9F8VPK8 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdh9F8VPK8 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.27□□□□□ -0.13
Pcdh9F8VPK8 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdh9F8VPK8 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh9F8VPK8 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh9F8VPK8 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh9F8VPK8 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh9F8VPK8 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 Gm37714-201ENSMUST00000194742 342 ntBASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh9F8VPK8 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Gm23935-201ENSMUST00000102303 57 ntBASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Gm24270-201ENSMUST00000102326 57 ntBASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Gm24245-201ENSMUST00000157318 57 ntBASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Gm9719-201ENSMUST00000162765 543 ntBASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Gm18766-201ENSMUST00000189811 808 ntBASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Gm43474-201ENSMUST00000196415 774 ntBASIC14.25□□□□□ -0.13
Pcdh9F8VPK8 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms