Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb9E9Q5G2 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb9E9Q5G2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Pcdhb9E9Q5G2 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb9E9Q5G2 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb9E9Q5G2 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb9E9Q5G2 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb9E9Q5G2 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 Gm9794-201ENSMUST00000202370 423 ntBASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb9E9Q5G2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 Gm8515-201ENSMUST00000194852 576 ntBASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 Gm9908-201ENSMUST00000211534 448 ntBASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb9E9Q5G2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Gm15678-201ENSMUST00000117573 960 ntBASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Gm12490-201ENSMUST00000120255 560 ntBASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Gm12091-201ENSMUST00000146791 830 ntBASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Gm6745-201ENSMUST00000199216 526 ntBASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 AC131997.1-201ENSMUST00000228611 1229 ntBASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb9E9Q5G2 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms