Protein–RNA interactions for Protein: E9Q414

Apob, Apolipoprotein B-100, mousemouse

Predictions only

Length 4,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApobE9Q414 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
ApobE9Q414 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
ApobE9Q414 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC8.28□□□□□ -1.08
ApobE9Q414 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
ApobE9Q414 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC8.27□□□□□ -1.08
ApobE9Q414 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
ApobE9Q414 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
ApobE9Q414 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
ApobE9Q414 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
ApobE9Q414 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
ApobE9Q414 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.08
ApobE9Q414 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC8.27□□□□□ -1.08
ApobE9Q414 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
ApobE9Q414 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
ApobE9Q414 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
ApobE9Q414 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
ApobE9Q414 Gm11637-201ENSMUST00000120601 592 ntBASIC8.27□□□□□ -1.09
ApobE9Q414 Gm8908-201ENSMUST00000121633 1024 ntBASIC8.27□□□□□ -1.09
ApobE9Q414 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
ApobE9Q414 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC8.27□□□□□ -1.09
ApobE9Q414 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC8.27□□□□□ -1.09
ApobE9Q414 Gm5363-201ENSMUST00000211927 938 ntBASIC8.27□□□□□ -1.09
ApobE9Q414 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
ApobE9Q414 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
ApobE9Q414 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
ApobE9Q414 Gm38157-201ENSMUST00000194178 1698 ntBASIC8.27□□□□□ -1.09
ApobE9Q414 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
ApobE9Q414 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
ApobE9Q414 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
ApobE9Q414 Gm43273-201ENSMUST00000199649 2594 ntBASIC8.27□□□□□ -1.09
ApobE9Q414 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
ApobE9Q414 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
ApobE9Q414 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
ApobE9Q414 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
ApobE9Q414 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
ApobE9Q414 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
ApobE9Q414 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
ApobE9Q414 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC8.27□□□□□ -1.09
ApobE9Q414 Gm2606-201ENSMUST00000100754 1002 ntBASIC8.27□□□□□ -1.09
ApobE9Q414 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
ApobE9Q414 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC8.27□□□□□ -1.09
ApobE9Q414 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
ApobE9Q414 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC8.27□□□□□ -1.09
ApobE9Q414 Gm5869-201ENSMUST00000200248 1257 ntBASIC8.27□□□□□ -1.09
ApobE9Q414 Gm7293-201ENSMUST00000216682 1007 ntBASIC8.27□□□□□ -1.09
ApobE9Q414 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
ApobE9Q414 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
ApobE9Q414 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
ApobE9Q414 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
ApobE9Q414 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
ApobE9Q414 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
ApobE9Q414 Gm43289-201ENSMUST00000200537 1475 ntBASIC8.27□□□□□ -1.09
ApobE9Q414 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
ApobE9Q414 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
ApobE9Q414 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
ApobE9Q414 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
ApobE9Q414 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC8.27□□□□□ -1.09
ApobE9Q414 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC8.27□□□□□ -1.09
ApobE9Q414 Gm25732-201ENSMUST00000175168 60 ntBASIC8.27□□□□□ -1.09
ApobE9Q414 Gstp-ps-201ENSMUST00000195526 631 ntBASIC8.27□□□□□ -1.09
ApobE9Q414 Gm43138-201ENSMUST00000199123 708 ntBASIC8.27□□□□□ -1.09
ApobE9Q414 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC8.27□□□□□ -1.09
ApobE9Q414 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
ApobE9Q414 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
ApobE9Q414 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
ApobE9Q414 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
ApobE9Q414 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
ApobE9Q414 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
ApobE9Q414 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
ApobE9Q414 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
ApobE9Q414 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
ApobE9Q414 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
ApobE9Q414 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC8.26□□□□□ -1.09
ApobE9Q414 Gm8712-201ENSMUST00000221090 701 ntBASIC8.26□□□□□ -1.09
ApobE9Q414 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
ApobE9Q414 Gm10702-201ENSMUST00000098929 1268 ntBASIC8.26□□□□□ -1.09
ApobE9Q414 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC8.26□□□□□ -1.09
ApobE9Q414 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
ApobE9Q414 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
ApobE9Q414 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
ApobE9Q414 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC8.26□□□□□ -1.09
ApobE9Q414 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
ApobE9Q414 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
ApobE9Q414 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
ApobE9Q414 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
ApobE9Q414 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
ApobE9Q414 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
ApobE9Q414 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC8.26□□□□□ -1.09
ApobE9Q414 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
ApobE9Q414 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
ApobE9Q414 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC8.26□□□□□ -1.09
ApobE9Q414 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC8.26□□□□□ -1.09
ApobE9Q414 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
ApobE9Q414 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC8.26□□□□□ -1.09
ApobE9Q414 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
ApobE9Q414 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
ApobE9Q414 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
ApobE9Q414 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
ApobE9Q414 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
ApobE9Q414 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms