Protein–RNA interactions for Protein: E9Q0B4

Cdr1, Cerebellar degeneration-related antigen 1, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdr1E9Q0B4 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Gm12644-201ENSMUST00000119935 606 ntBASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdr1E9Q0B4 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Gm4535-201ENSMUST00000182274 558 ntBASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Gm10355-201ENSMUST00000097146 517 ntBASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.67□□□□□ -0.22
Cdr1E9Q0B4 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdr1E9Q0B4 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdr1E9Q0B4 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdr1E9Q0B4 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdr1E9Q0B4 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdr1E9Q0B4 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Cdr1E9Q0B4 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cdr1E9Q0B4 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdr1E9Q0B4 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdr1E9Q0B4 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdr1E9Q0B4 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdr1E9Q0B4 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cdr1E9Q0B4 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms