Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm28043E0CXC2 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm28043E0CXC2 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm28043E0CXC2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm28043E0CXC2 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm28043E0CXC2 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm28043E0CXC2 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gm28043E0CXC2 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Gm28043E0CXC2 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Gm28043E0CXC2 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Gm28043E0CXC2 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gm28043E0CXC2 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gm28043E0CXC2 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.98□□□□□ -0.17
Gm28043E0CXC2 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.98□□□□□ -0.17
Gm28043E0CXC2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Gm28043E0CXC2 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gm28043E0CXC2 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gm28043E0CXC2 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Gm28043E0CXC2 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gm28043E0CXC2 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Gm28043E0CXC2 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Gm28043E0CXC2 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.98□□□□□ -0.17
Gm28043E0CXC2 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.98□□□□□ -0.17
Gm28043E0CXC2 Gm2810-201ENSMUST00000118681 990 ntBASIC13.98□□□□□ -0.17
Gm28043E0CXC2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Gm28043E0CXC2 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.98□□□□□ -0.17
Gm28043E0CXC2 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.98□□□□□ -0.17
Gm28043E0CXC2 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Gm28043E0CXC2 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Gm28043E0CXC2 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gm28043E0CXC2 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gm28043E0CXC2 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gm28043E0CXC2 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Gm28043E0CXC2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Gm28043E0CXC2 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Gm28043E0CXC2 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Gm28043E0CXC2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Gm28043E0CXC2 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Gm14822-201ENSMUST00000122247 291 ntBASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Gm28043E0CXC2 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Gm28043E0CXC2 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gm28043E0CXC2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gm28043E0CXC2 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gm28043E0CXC2 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Gm28043E0CXC2 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Gm28043E0CXC2 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gm28043E0CXC2 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.96□□□□□ -0.17
Gm28043E0CXC2 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gm28043E0CXC2 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gm28043E0CXC2 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.96□□□□□ -0.17
Gm28043E0CXC2 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gm28043E0CXC2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.96□□□□□ -0.17
Gm28043E0CXC2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.96□□□□□ -0.17
Gm28043E0CXC2 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.96□□□□□ -0.17
Gm28043E0CXC2 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.96□□□□□ -0.17
Gm28043E0CXC2 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.96□□□□□ -0.17
Gm28043E0CXC2 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.96□□□□□ -0.17
Gm28043E0CXC2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gm28043E0CXC2 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Gm28043E0CXC2 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Gm28043E0CXC2 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms