Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a6B1AVK5 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.02□□□□□ -0.16
Col4a6B1AVK5 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a6B1AVK5 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a6B1AVK5 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a6B1AVK5 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a6B1AVK5 Gm11222-201ENSMUST00000119005 738 ntBASIC14.02□□□□□ -0.16
Col4a6B1AVK5 Gm12134-201ENSMUST00000122109 520 ntBASIC14.02□□□□□ -0.16
Col4a6B1AVK5 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a6B1AVK5 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a6B1AVK5 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.02□□□□□ -0.16
Col4a6B1AVK5 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC14.02□□□□□ -0.16
Col4a6B1AVK5 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.02□□□□□ -0.16
Col4a6B1AVK5 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.02□□□□□ -0.16
Col4a6B1AVK5 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.16
Col4a6B1AVK5 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Col4a6B1AVK5 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a6B1AVK5 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a6B1AVK5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a6B1AVK5 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a6B1AVK5 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a6B1AVK5 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.02□□□□□ -0.17
Col4a6B1AVK5 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a6B1AVK5 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a6B1AVK5 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a6B1AVK5 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a6B1AVK5 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a6B1AVK5 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Col4a6B1AVK5 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a6B1AVK5 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Col4a6B1AVK5 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a6B1AVK5 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Mir5132-201ENSMUST00000175166 71 ntBASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Gm4768-201ENSMUST00000206199 686 ntBASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Gm8805-201ENSMUST00000117848 313 ntBASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Gm15782-201ENSMUST00000121073 445 ntBASIC14.01□□□□□ -0.17
Col4a6B1AVK5 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Gm25668-201ENSMUST00000157700 129 ntBASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Gm45186-201ENSMUST00000206874 478 ntBASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Gm5363-201ENSMUST00000211927 938 ntBASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Gm7293-201ENSMUST00000216682 1007 ntBASIC14.01□□□□□ -0.17
Col4a6B1AVK5 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Mir433-201ENSMUST00000093564 124 ntBASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Col4a6B1AVK5 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a6B1AVK5 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a6B1AVK5 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a6B1AVK5 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a6B1AVK5 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14□□□□□ -0.17
Col4a6B1AVK5 Gm45504-201ENSMUST00000211407 2107 ntBASIC14□□□□□ -0.17
Col4a6B1AVK5 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a6B1AVK5 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a6B1AVK5 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a6B1AVK5 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a6B1AVK5 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a6B1AVK5 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a6B1AVK5 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a6B1AVK5 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col4a6B1AVK5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Col4a6B1AVK5 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a6B1AVK5 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a6B1AVK5 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC14□□□□□ -0.17
Col4a6B1AVK5 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14□□□□□ -0.17
Col4a6B1AVK5 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Col4a6B1AVK5 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms