Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc112A0AUP1 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.9■□□□□ 0.14
Ccdc112A0AUP1 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.9■□□□□ 0.14
Ccdc112A0AUP1 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc112A0AUP1 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc112A0AUP1 Mir125a-201ENSMUST00000083545 68 ntBASIC15.9■□□□□ 0.14
Ccdc112A0AUP1 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc112A0AUP1 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc112A0AUP1 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Ccdc112A0AUP1 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc112A0AUP1 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc112A0AUP1 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc112A0AUP1 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.9■□□□□ 0.14
Ccdc112A0AUP1 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc112A0AUP1 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc112A0AUP1 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc112A0AUP1 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc112A0AUP1 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.9■□□□□ 0.14
Ccdc112A0AUP1 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Ccdc112A0AUP1 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc112A0AUP1 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc112A0AUP1 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.9■□□□□ 0.14
Ccdc112A0AUP1 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Ccdc112A0AUP1 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc112A0AUP1 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc112A0AUP1 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.89■□□□□ 0.13
Ccdc112A0AUP1 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc112A0AUP1 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc112A0AUP1 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc112A0AUP1 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc112A0AUP1 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.89■□□□□ 0.13
Ccdc112A0AUP1 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Ccdc112A0AUP1 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.89■□□□□ 0.13
Ccdc112A0AUP1 Gm13365-201ENSMUST00000121188 973 ntBASIC15.89■□□□□ 0.13
Ccdc112A0AUP1 Mir1895-201ENSMUST00000122615 79 ntBASIC15.89■□□□□ 0.13
Ccdc112A0AUP1 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.89■□□□□ 0.13
Ccdc112A0AUP1 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.89■□□□□ 0.13
Ccdc112A0AUP1 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.89■□□□□ 0.13
Ccdc112A0AUP1 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc112A0AUP1 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc112A0AUP1 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.89■□□□□ 0.13
Ccdc112A0AUP1 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
Ccdc112A0AUP1 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc112A0AUP1 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc112A0AUP1 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc112A0AUP1 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc112A0AUP1 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Gm27525-201ENSMUST00000184465 107 ntBASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Gm18027-201ENSMUST00000218947 619 ntBASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc112A0AUP1 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc112A0AUP1 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc112A0AUP1 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc112A0AUP1 Grk6-205ENSMUST00000224653 2976 ntBASIC15.87■□□□□ 0.13
Ccdc112A0AUP1 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc112A0AUP1 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc112A0AUP1 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Ccdc112A0AUP1 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc112A0AUP1 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc112A0AUP1 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc112A0AUP1 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.87■□□□□ 0.13
Ccdc112A0AUP1 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc112A0AUP1 Gm25287-201ENSMUST00000103846 110 ntBASIC15.87■□□□□ 0.13
Ccdc112A0AUP1 Gm22918-201ENSMUST00000103855 110 ntBASIC15.87■□□□□ 0.13
Ccdc112A0AUP1 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Ccdc112A0AUP1 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc112A0AUP1 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc112A0AUP1 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ccdc112A0AUP1 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms