Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cfap99A0A140LIX9 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cfap99A0A140LIX9 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.65■□□□□ 0.26
Cfap99A0A140LIX9 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.65■□□□□ 0.26
Cfap99A0A140LIX9 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.65■□□□□ 0.26
Cfap99A0A140LIX9 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.65■□□□□ 0.26
Cfap99A0A140LIX9 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cfap99A0A140LIX9 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cfap99A0A140LIX9 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cfap99A0A140LIX9 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cfap99A0A140LIX9 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cfap99A0A140LIX9 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cfap99A0A140LIX9 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cfap99A0A140LIX9 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cfap99A0A140LIX9 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cfap99A0A140LIX9 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cfap99A0A140LIX9 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cfap99A0A140LIX9 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cfap99A0A140LIX9 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.65■□□□□ 0.26
Cfap99A0A140LIX9 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cfap99A0A140LIX9 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cfap99A0A140LIX9 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cfap99A0A140LIX9 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cfap99A0A140LIX9 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 Gm6266-201ENSMUST00000203844 806 ntBASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 BC001981-202ENSMUST00000191393 1545 ntBASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.64■□□□□ 0.25
Cfap99A0A140LIX9 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Gm9002-201ENSMUST00000178437 499 ntBASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Mir7085-201ENSMUST00000184353 66 ntBASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Cfap99A0A140LIX9 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cfap99A0A140LIX9 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cfap99A0A140LIX9 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cfap99A0A140LIX9 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cfap99A0A140LIX9 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
Cfap99A0A140LIX9 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cfap99A0A140LIX9 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cfap99A0A140LIX9 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
Cfap99A0A140LIX9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cfap99A0A140LIX9 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cfap99A0A140LIX9 Gm15460-201ENSMUST00000118147 391 ntBASIC16.62■□□□□ 0.25
Cfap99A0A140LIX9 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC16.62■□□□□ 0.25
Cfap99A0A140LIX9 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cfap99A0A140LIX9 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cfap99A0A140LIX9 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.62■□□□□ 0.25
Cfap99A0A140LIX9 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms