Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gm5312-201ENSMUST00000203728 547 ntBASIC10.14□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav9n-2A0A0G2JDP3 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm44291-201ENSMUST00000203102 2865 ntBASIC10.14□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm9347-201ENSMUST00000211473 1607 ntBASIC10.14□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm23935-201ENSMUST00000102303 57 ntBASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm24270-201ENSMUST00000102326 57 ntBASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm14701-201ENSMUST00000117156 348 ntBASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm24245-201ENSMUST00000157318 57 ntBASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm29541-201ENSMUST00000191351 678 ntBASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 AC090659.2-201ENSMUST00000225378 1186 ntBASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 BC001981-202ENSMUST00000191393 1545 ntBASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Mir449b-201ENSMUST00000104833 80 ntBASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm6415-201ENSMUST00000118488 348 ntBASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Ighv8-14-201ENSMUST00000196781 358 ntBASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 AC140397.2-201ENSMUST00000224213 834 ntBASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav9n-2A0A0G2JDP3 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms