Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Gm13410-201ENSMUST00000117058 1415 ntBASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Gm9385-201ENSMUST00000117563 472 ntBASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Gm17971-201ENSMUST00000190239 806 ntBASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Klk2-ps-201ENSMUST00000205342 571 ntBASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Gm6198-201ENSMUST00000191337 2929 ntBASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Ntrk2-208ENSMUST00000225583 2719 ntBASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Mir5126-201ENSMUST00000175513 77 ntBASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Gm5177-201ENSMUST00000183092 997 ntBASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Gm10459-201ENSMUST00000202708 1155 ntBASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Gm45747-201ENSMUST00000212203 999 ntBASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Gm38346-201ENSMUST00000192379 2639 ntBASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav13-4-dv7A0A075B6C2 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC9.59□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 AC115735.4-201ENSMUST00000227460 1944 ntBASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms