Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5-4A0A075B652 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5-4A0A075B652 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.68□□□□□ -0.54
Trav5-4A0A075B652 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5-4A0A075B652 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.68□□□□□ -0.54
Trav5-4A0A075B652 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav5-4A0A075B652 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5-4A0A075B652 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5-4A0A075B652 Paupar-201ENSMUST00000194826 3482 ntBASIC11.68□□□□□ -0.54
Trav5-4A0A075B652 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5-4A0A075B652 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5-4A0A075B652 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5-4A0A075B652 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5-4A0A075B652 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav5-4A0A075B652 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav5-4A0A075B652 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5-4A0A075B652 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5-4A0A075B652 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5-4A0A075B652 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav5-4A0A075B652 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav5-4A0A075B652 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Gm25911-201ENSMUST00000157621 56 ntBASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Gm27494-201ENSMUST00000184735 189 ntBASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav5-4A0A075B652 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5-4A0A075B652 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms