Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Speer3W4VSP1 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Speer3W4VSP1 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Speer3W4VSP1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.27□□□□□ -0.12
Speer3W4VSP1 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Speer3W4VSP1 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.27□□□□□ -0.12
Speer3W4VSP1 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Speer3W4VSP1 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Speer3W4VSP1 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
Speer3W4VSP1 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.27□□□□□ -0.12
Speer3W4VSP1 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Speer3W4VSP1 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Speer3W4VSP1 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Speer3W4VSP1 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Speer3W4VSP1 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Speer3W4VSP1 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Speer3W4VSP1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Speer3W4VSP1 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Speer3W4VSP1 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Speer3W4VSP1 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.27□□□□□ -0.13
Speer3W4VSP1 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Speer3W4VSP1 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Speer3W4VSP1 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Speer3W4VSP1 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.27□□□□□ -0.13
Speer3W4VSP1 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Speer3W4VSP1 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.27□□□□□ -0.13
Speer3W4VSP1 Gm45747-201ENSMUST00000212203 999 ntBASIC14.27□□□□□ -0.13
Speer3W4VSP1 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Speer3W4VSP1 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Speer3W4VSP1 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Speer3W4VSP1 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Speer3W4VSP1 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Speer3W4VSP1 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Speer3W4VSP1 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Speer3W4VSP1 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Speer3W4VSP1 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.27□□□□□ -0.13
Speer3W4VSP1 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Speer3W4VSP1 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Speer3W4VSP1 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Speer3W4VSP1 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.27□□□□□ -0.13
Speer3W4VSP1 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Speer3W4VSP1 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.27□□□□□ -0.13
Speer3W4VSP1 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Speer3W4VSP1 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Speer3W4VSP1 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Speer3W4VSP1 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Speer3W4VSP1 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Speer3W4VSP1 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.26□□□□□ -0.13
Speer3W4VSP1 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Speer3W4VSP1 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.26□□□□□ -0.13
Speer3W4VSP1 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.26□□□□□ -0.13
Speer3W4VSP1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Speer3W4VSP1 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Gm42941-201ENSMUST00000200347 1321 ntBASIC14.26□□□□□ -0.13
Speer3W4VSP1 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Speer3W4VSP1 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Gm9726-201ENSMUST00000180321 678 ntBASIC14.26□□□□□ -0.13
Speer3W4VSP1 Gm36943-201ENSMUST00000194422 282 ntBASIC14.26□□□□□ -0.13
Speer3W4VSP1 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.26□□□□□ -0.13
Speer3W4VSP1 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.26□□□□□ -0.13
Speer3W4VSP1 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Speer3W4VSP1 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Speer3W4VSP1 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms