Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.78□□□□□ -0.52
Six6Q9QZ28 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Gm18489-201ENSMUST00000172565 551 ntBASIC11.78□□□□□ -0.52
Six6Q9QZ28 Gm29518-201ENSMUST00000190858 372 ntBASIC11.78□□□□□ -0.52
Six6Q9QZ28 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six6Q9QZ28 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six6Q9QZ28 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.78□□□□□ -0.52
Six6Q9QZ28 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six6Q9QZ28 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Six6Q9QZ28 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Six6Q9QZ28 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Six6Q9QZ28 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Six6Q9QZ28 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Six6Q9QZ28 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Six6Q9QZ28 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Six6Q9QZ28 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Six6Q9QZ28 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Six6Q9QZ28 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Six6Q9QZ28 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Six6Q9QZ28 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Six6Q9QZ28 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.77□□□□□ -0.52
Six6Q9QZ28 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six6Q9QZ28 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Six6Q9QZ28 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six6Q9QZ28 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six6Q9QZ28 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six6Q9QZ28 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six6Q9QZ28 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC11.77□□□□□ -0.53
Six6Q9QZ28 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Six6Q9QZ28 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Six6Q9QZ28 AC159106.1-201ENSMUST00000224421 690 ntBASIC11.77□□□□□ -0.53
Six6Q9QZ28 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six6Q9QZ28 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six6Q9QZ28 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six6Q9QZ28 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six6Q9QZ28 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Six6Q9QZ28 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Six6Q9QZ28 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six6Q9QZ28 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Six6Q9QZ28 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Six6Q9QZ28 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six6Q9QZ28 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six6Q9QZ28 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six6Q9QZ28 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six6Q9QZ28 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six6Q9QZ28 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six6Q9QZ28 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Six6Q9QZ28 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six6Q9QZ28 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six6Q9QZ28 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Six6Q9QZ28 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Six6Q9QZ28 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six6Q9QZ28 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six6Q9QZ28 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.76□□□□□ -0.53
Six6Q9QZ28 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six6Q9QZ28 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six6Q9QZ28 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six6Q9QZ28 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC11.76□□□□□ -0.53
Six6Q9QZ28 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six6Q9QZ28 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Six6Q9QZ28 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six6Q9QZ28 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six6Q9QZ28 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Six6Q9QZ28 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Six6Q9QZ28 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six6Q9QZ28 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six6Q9QZ28 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.76□□□□□ -0.53
Six6Q9QZ28 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six6Q9QZ28 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six6Q9QZ28 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six6Q9QZ28 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Six6Q9QZ28 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms