Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Gm4459-201ENSMUST00000118750 468 ntBASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trem1Q9JKE2 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trem1Q9JKE2 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trem1Q9JKE2 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trem1Q9JKE2 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trem1Q9JKE2 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trem1Q9JKE2 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trem1Q9JKE2 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trem1Q9JKE2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trem1Q9JKE2 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trem1Q9JKE2 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trem1Q9JKE2 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trem1Q9JKE2 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trem1Q9JKE2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trem1Q9JKE2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trem1Q9JKE2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.46□□□□□ -0.41
Trem1Q9JKE2 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trem1Q9JKE2 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trem1Q9JKE2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trem1Q9JKE2 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trem1Q9JKE2 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trem1Q9JKE2 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trem1Q9JKE2 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trem1Q9JKE2 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trem1Q9JKE2 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trem1Q9JKE2 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trem1Q9JKE2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trem1Q9JKE2 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trem1Q9JKE2 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trem1Q9JKE2 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trem1Q9JKE2 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trem1Q9JKE2 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trem1Q9JKE2 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trem1Q9JKE2 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Trem1Q9JKE2 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Gm15165-201ENSMUST00000118140 502 ntBASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trem1Q9JKE2 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms