Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl28Q9JIL2 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Gm11745-201ENSMUST00000121669 448 ntBASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Gm45612-201ENSMUST00000211320 160 ntBASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl28Q9JIL2 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccl28Q9JIL2 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms