Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube3bQ9ES34 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ube3bQ9ES34 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ube3bQ9ES34 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Ube3bQ9ES34 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ube3bQ9ES34 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Ube3bQ9ES34 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ube3bQ9ES34 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.52■□□□□ 0.24
Ube3bQ9ES34 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ube3bQ9ES34 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ube3bQ9ES34 Gm11918-201ENSMUST00000121660 179 ntBASIC16.52■□□□□ 0.24
Ube3bQ9ES34 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC16.52■□□□□ 0.24
Ube3bQ9ES34 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ube3bQ9ES34 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ube3bQ9ES34 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ube3bQ9ES34 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ube3bQ9ES34 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ube3bQ9ES34 Gm28911-201ENSMUST00000188837 117 ntBASIC16.52■□□□□ 0.24
Ube3bQ9ES34 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ube3bQ9ES34 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.52■□□□□ 0.24
Ube3bQ9ES34 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.52■□□□□ 0.24
Ube3bQ9ES34 AC131997.1-201ENSMUST00000228611 1229 ntBASIC16.52■□□□□ 0.24
Ube3bQ9ES34 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ube3bQ9ES34 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ube3bQ9ES34 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ube3bQ9ES34 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ube3bQ9ES34 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ube3bQ9ES34 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ube3bQ9ES34 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ube3bQ9ES34 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ube3bQ9ES34 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ube3bQ9ES34 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Ube3bQ9ES34 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.52■□□□□ 0.23
Ube3bQ9ES34 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3bQ9ES34 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3bQ9ES34 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3bQ9ES34 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.51■□□□□ 0.23
Ube3bQ9ES34 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3bQ9ES34 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ube3bQ9ES34 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3bQ9ES34 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ube3bQ9ES34 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3bQ9ES34 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ube3bQ9ES34 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Ube3bQ9ES34 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ube3bQ9ES34 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.51■□□□□ 0.23
Ube3bQ9ES34 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.51■□□□□ 0.23
Ube3bQ9ES34 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.51■□□□□ 0.23
Ube3bQ9ES34 Gm44719-201ENSMUST00000206404 149 ntBASIC16.51■□□□□ 0.23
Ube3bQ9ES34 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Ube3bQ9ES34 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Ube3bQ9ES34 Gm24447-201ENSMUST00000083977 338 ntBASIC16.51■□□□□ 0.23
Ube3bQ9ES34 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.51■□□□□ 0.23
Ube3bQ9ES34 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3bQ9ES34 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3bQ9ES34 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3bQ9ES34 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Ube3bQ9ES34 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3bQ9ES34 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Ube3bQ9ES34 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3bQ9ES34 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3bQ9ES34 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Gm5161-201ENSMUST00000075243 853 ntBASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3bQ9ES34 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms