Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.39□□□□□ -0.27
Ube4bQ9ES00 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Gm10499-201ENSMUST00000174094 934 ntBASIC13.38□□□□□ -0.27
Ube4bQ9ES00 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Rps4l-201ENSMUST00000071745 943 ntBASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.38□□□□□ -0.27
Ube4bQ9ES00 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ube4bQ9ES00 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ube4bQ9ES00 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.37□□□□□ -0.27
Ube4bQ9ES00 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ube4bQ9ES00 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ube4bQ9ES00 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.37□□□□□ -0.27
Ube4bQ9ES00 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.37□□□□□ -0.27
Ube4bQ9ES00 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ube4bQ9ES00 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ube4bQ9ES00 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ube4bQ9ES00 Gm25990-201ENSMUST00000102440 86 ntBASIC13.37□□□□□ -0.27
Ube4bQ9ES00 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.37□□□□□ -0.27
Ube4bQ9ES00 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ube4bQ9ES00 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ube4bQ9ES00 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.37□□□□□ -0.27
Ube4bQ9ES00 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ube4bQ9ES00 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.37□□□□□ -0.27
Ube4bQ9ES00 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ube4bQ9ES00 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ube4bQ9ES00 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
Ube4bQ9ES00 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ube4bQ9ES00 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.37□□□□□ -0.27
Ube4bQ9ES00 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ube4bQ9ES00 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ube4bQ9ES00 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Ube4bQ9ES00 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ube4bQ9ES00 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ube4bQ9ES00 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ube4bQ9ES00 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ube4bQ9ES00 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ube4bQ9ES00 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ube4bQ9ES00 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ube4bQ9ES00 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ube4bQ9ES00 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ube4bQ9ES00 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ube4bQ9ES00 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Ube4bQ9ES00 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ube4bQ9ES00 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ube4bQ9ES00 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ube4bQ9ES00 Gm24589-201ENSMUST00000116692 94 ntBASIC13.36□□□□□ -0.27
Ube4bQ9ES00 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.36□□□□□ -0.27
Ube4bQ9ES00 Gm18489-201ENSMUST00000172565 551 ntBASIC13.36□□□□□ -0.27
Ube4bQ9ES00 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ube4bQ9ES00 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.36□□□□□ -0.27
Ube4bQ9ES00 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.36□□□□□ -0.27
Ube4bQ9ES00 Gm6376-201ENSMUST00000209407 580 ntBASIC13.36□□□□□ -0.27
Ube4bQ9ES00 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.36□□□□□ -0.27
Ube4bQ9ES00 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ube4bQ9ES00 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ube4bQ9ES00 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms