Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 Gm25261-201ENSMUST00000157416 134 ntBASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 Gm24447-201ENSMUST00000083977 338 ntBASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Gm26927-201ENSMUST00000182385 965 ntBASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Gm6621-201ENSMUST00000193251 772 ntBASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-4Q9EQM3 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Nkx2-4Q9EQM3 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx2-4Q9EQM3 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
Nkx2-4Q9EQM3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.21□□□□□ -0.14
Nkx2-4Q9EQM3 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx2-4Q9EQM3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.21□□□□□ -0.14
Nkx2-4Q9EQM3 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx2-4Q9EQM3 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Gm13786-201ENSMUST00000122371 333 ntBASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Gm8227-201ENSMUST00000223306 571 ntBASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.2□□□□□ -0.14
Nkx2-4Q9EQM3 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms