Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Gm15358-201ENSMUST00000119249 520 ntBASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hmg20aQ9DC33 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hmg20aQ9DC33 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmg20aQ9DC33 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmg20aQ9DC33 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hmg20aQ9DC33 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmg20aQ9DC33 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmg20aQ9DC33 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Hmg20aQ9DC33 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hmg20aQ9DC33 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmg20aQ9DC33 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmg20aQ9DC33 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmg20aQ9DC33 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Hmg20aQ9DC33 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmg20aQ9DC33 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmg20aQ9DC33 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmg20aQ9DC33 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmg20aQ9DC33 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.71□□□□□ -0.37
Hmg20aQ9DC33 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.71□□□□□ -0.37
Hmg20aQ9DC33 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Hmg20aQ9DC33 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.71□□□□□ -0.37
Hmg20aQ9DC33 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.71□□□□□ -0.37
Hmg20aQ9DC33 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.71□□□□□ -0.37
Hmg20aQ9DC33 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmg20aQ9DC33 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmg20aQ9DC33 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmg20aQ9DC33 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmg20aQ9DC33 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmg20aQ9DC33 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Hmg20aQ9DC33 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmg20aQ9DC33 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmg20aQ9DC33 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmg20aQ9DC33 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmg20aQ9DC33 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmg20aQ9DC33 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.71□□□□□ -0.38
Hmg20aQ9DC33 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmg20aQ9DC33 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmg20aQ9DC33 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmg20aQ9DC33 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmg20aQ9DC33 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.71□□□□□ -0.38
Hmg20aQ9DC33 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmg20aQ9DC33 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmg20aQ9DC33 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmg20aQ9DC33 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmg20aQ9DC33 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmg20aQ9DC33 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hmg20aQ9DC33 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmg20aQ9DC33 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hmg20aQ9DC33 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmg20aQ9DC33 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Hmg20aQ9DC33 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmg20aQ9DC33 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmg20aQ9DC33 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmg20aQ9DC33 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmg20aQ9DC33 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.7□□□□□ -0.38
Hmg20aQ9DC33 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.7□□□□□ -0.38
Hmg20aQ9DC33 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Hmg20aQ9DC33 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmg20aQ9DC33 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmg20aQ9DC33 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms