Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp4bQ9D8B3 Gm43056-201ENSMUST00000197865 2791 ntBASIC17.57■□□□□ 0.4
Chmp4bQ9D8B3 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp4bQ9D8B3 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp4bQ9D8B3 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp4bQ9D8B3 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp4bQ9D8B3 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp4bQ9D8B3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp4bQ9D8B3 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp4bQ9D8B3 Gm4804-201ENSMUST00000182234 999 ntBASIC17.56■□□□□ 0.4
Chmp4bQ9D8B3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.56■□□□□ 0.4
Chmp4bQ9D8B3 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.56■□□□□ 0.4
Chmp4bQ9D8B3 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp4bQ9D8B3 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp4bQ9D8B3 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp4bQ9D8B3 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp4bQ9D8B3 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp4bQ9D8B3 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp4bQ9D8B3 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp4bQ9D8B3 Gm37019-201ENSMUST00000192133 2134 ntBASIC17.56■□□□□ 0.4
Chmp4bQ9D8B3 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp4bQ9D8B3 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 Gm14767-201ENSMUST00000121559 586 ntBASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 Gm22175-201ENSMUST00000175007 78 ntBASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 Ighv1-51-201ENSMUST00000192903 354 ntBASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 AC166997.1-201ENSMUST00000225122 572 ntBASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp4bQ9D8B3 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4bQ9D8B3 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4bQ9D8B3 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4bQ9D8B3 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4bQ9D8B3 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4bQ9D8B3 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4bQ9D8B3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.54■□□□□ 0.4
Chmp4bQ9D8B3 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4bQ9D8B3 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4bQ9D8B3 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4bQ9D8B3 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4bQ9D8B3 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4bQ9D8B3 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC17.54■□□□□ 0.4
Chmp4bQ9D8B3 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4bQ9D8B3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.54■□□□□ 0.4
Chmp4bQ9D8B3 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4bQ9D8B3 Gm7820-201ENSMUST00000121012 1052 ntBASIC17.54■□□□□ 0.4
Chmp4bQ9D8B3 Gm6283-201ENSMUST00000182369 1000 ntBASIC17.54■□□□□ 0.4
Chmp4bQ9D8B3 Gm21470-201ENSMUST00000187680 696 ntBASIC17.54■□□□□ 0.4
Chmp4bQ9D8B3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4bQ9D8B3 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC17.54■□□□□ 0.4
Chmp4bQ9D8B3 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4bQ9D8B3 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Chmp4bQ9D8B3 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4bQ9D8B3 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Chmp4bQ9D8B3 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Chmp4bQ9D8B3 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Chmp4bQ9D8B3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp4bQ9D8B3 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Mir698-201ENSMUST00000102164 109 ntBASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Gm15393-201ENSMUST00000120499 219 ntBASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Gm3436-201ENSMUST00000179930 840 ntBASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms